Publication date
September 2023
DOIAbstract
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long accurate reads with metaMDBG" to assess HiFi metagenomics assembly qualit
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long accurate reads with metaMDBG" to assess HiFi metagenomics assembly qualit
Synthetic benchmark metagenomes and annotations used to benchmark taxonomic classification approache...
Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the com...
Snakemake scripts for producing results described in publication. Jupyter notebook for producing fi...
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long ...
Summary: MetaABC is a metagenomic platform that integrates several binning tools coupled with method...
This dataset includes the different metagenomics assemblies analyzed and its summary (_info.txt file...
Metagenome assembled genomes (MAGs) generated by taking raw reads from 58 samples that were quality-...
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct...
The DOE Joint Genome Institute (JGI) Metagenome Workflow performs metagenome data processing, includ...
Genome assemblies, simulated datasets and evaluations described in the manuscript "metaFlye: scalabl...
We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS ...
Supporting data for the manuscript titled "Generation of lineage-resolved complete metagenome-assemb...
IMG/M is a data management and analysis system for microbial community genomes (metagenomes) hosted ...
<p>Metagenomic analysis of all sequence raw data from the different studied conditions.</p
Metagenome data sets present a qualitatively different assembly problem than traditional single-orga...
Synthetic benchmark metagenomes and annotations used to benchmark taxonomic classification approache...
Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the com...
Snakemake scripts for producing results described in publication. Jupyter notebook for producing fi...
A collection of scripts and workflows of the manuscript "High-quality metagenome assembly from long ...
Summary: MetaABC is a metagenomic platform that integrates several binning tools coupled with method...
This dataset includes the different metagenomics assemblies analyzed and its summary (_info.txt file...
Metagenome assembled genomes (MAGs) generated by taking raw reads from 58 samples that were quality-...
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct...
The DOE Joint Genome Institute (JGI) Metagenome Workflow performs metagenome data processing, includ...
Genome assemblies, simulated datasets and evaluations described in the manuscript "metaFlye: scalabl...
We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS ...
Supporting data for the manuscript titled "Generation of lineage-resolved complete metagenome-assemb...
IMG/M is a data management and analysis system for microbial community genomes (metagenomes) hosted ...
<p>Metagenomic analysis of all sequence raw data from the different studied conditions.</p
Metagenome data sets present a qualitatively different assembly problem than traditional single-orga...
Synthetic benchmark metagenomes and annotations used to benchmark taxonomic classification approache...
Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the com...
Snakemake scripts for producing results described in publication. Jupyter notebook for producing fi...
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