These are scripts we used for SNP variant calling. The locuslist provides a list of specific SNPs which were called for this analysis. We used samtools for variant calling
In order to reveal the molecular cause of observed phenotypic variation, geneticists map the respons...
With the rapid development of short-read sequencing technologies, many population-scale resequencing...
Variant call file listing genotypes for the filtered set of SNPs in the initial scan used in downstr...
These are scripts we used for SNP variant calling. The locuslist provides a list of specific SNPs wh...
<p>The numbers of reads and SNPs for individual steps are given for one exome-seq data set, generate...
In this file are the SNP data for all loci and all individuals, output by Stacks' populations module...
The success of many clinical, association, or population genetics studies critically relies on prope...
<p>The number of variants was based on the result of multi-sample calling from GATK.</p><p>List of g...
abstract: Analyzing human DNA sequence data allows researchers to identify variants associated with ...
Recent advances in variant calling made available in the Genome Analysis Toolkit (GATK) enable the u...
Structural variants are generally defined as DNA variations larger than 50bp. They have been recogn...
<p>Hierarchical cluster analysis of mutations called by the somatic variant callers in exome and dee...
The dataset contains a total of 2,366,382 SNPs detected between 117 A. m. iberiensis, 28 A. m. carni...
Variant call file listing genotypes for filtered SNPs after amplicon sequencing used in downstream a...
<p>Variant caller sensitivity for detecting the manually curated mutations for SNVs and indels are s...
In order to reveal the molecular cause of observed phenotypic variation, geneticists map the respons...
With the rapid development of short-read sequencing technologies, many population-scale resequencing...
Variant call file listing genotypes for the filtered set of SNPs in the initial scan used in downstr...
These are scripts we used for SNP variant calling. The locuslist provides a list of specific SNPs wh...
<p>The numbers of reads and SNPs for individual steps are given for one exome-seq data set, generate...
In this file are the SNP data for all loci and all individuals, output by Stacks' populations module...
The success of many clinical, association, or population genetics studies critically relies on prope...
<p>The number of variants was based on the result of multi-sample calling from GATK.</p><p>List of g...
abstract: Analyzing human DNA sequence data allows researchers to identify variants associated with ...
Recent advances in variant calling made available in the Genome Analysis Toolkit (GATK) enable the u...
Structural variants are generally defined as DNA variations larger than 50bp. They have been recogn...
<p>Hierarchical cluster analysis of mutations called by the somatic variant callers in exome and dee...
The dataset contains a total of 2,366,382 SNPs detected between 117 A. m. iberiensis, 28 A. m. carni...
Variant call file listing genotypes for filtered SNPs after amplicon sequencing used in downstream a...
<p>Variant caller sensitivity for detecting the manually curated mutations for SNVs and indels are s...
In order to reveal the molecular cause of observed phenotypic variation, geneticists map the respons...
With the rapid development of short-read sequencing technologies, many population-scale resequencing...
Variant call file listing genotypes for the filtered set of SNPs in the initial scan used in downstr...
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