SNP dataset retrieved from 176 whole-genome sequences (117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica)
- Dora Henriques (721562)
- Melanie Parejo (5024492)
- Alain Vignal (64468)
- David Wragg (447723)
- Andreas Wallberg (50034)
- Matthew Webster (5024489)
- M. Alice Pinto (721563)
Publication date
March 2018
DOIAbstract
The dataset contains a total of 2,366,382 SNPs detected between 117 A. m. iberiensis, 28 A. m. carnica and 31 A. m. ligustica. SNP calling was performed using three different variant calling tools: GATK's, SAMtools’ mpileup 1.1 and PLATYPUS 0.8.1 Details for SNP processing and quality control is provided in the paper and its supplementary information
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