Taxonomy assignments of each ASV generated from DADA2 using the RDP training set and the RDP classifier (implemented in DADA2; See SI Appendix, Materials and Methods). Saved as an RDS file to be read into R
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
<p>Sequences obtained from 16S rRNA gene libraries retrieved from environmental samples (black) and ...
These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data ...
Taxonomy assignments of each ASV generated from DADA2 using the RDP training set and the RDP classif...
Count table for ASVs generated from DADA2 from raw MiSeq reads. Rows are individual samples and colu...
<p>These DADA2-formatted training fastas were derived from the Ribosomal Database Project (RDP Train...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
Amplicon sequence variants (ASVs) and associated taxonomy called using DADA2 (v1.6.0) and Silva 16S ...
The RDP Classifier is a naive Bayesian classifier which was developed to provide rapid taxonomic pla...
Amplicon sequence variants (ASVs) and associated taxonomy called using DADA2 (v1.6.0) and Silva 16S ...
These DADA2-formatted training fasta files were derived from the Silva Project's version 138 release...
ASV feature table with SILVA taxonomic annotations. BIOM format can be easily read into R
I used a machine with Ubuntu 16.04 and DADA2 (vsn 1.5.2) to coax the Ribosomal Database Project's Tr...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
<p>Sequences obtained from 16S rRNA gene libraries retrieved from environmental samples (black) and ...
These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data ...
Taxonomy assignments of each ASV generated from DADA2 using the RDP training set and the RDP classif...
Count table for ASVs generated from DADA2 from raw MiSeq reads. Rows are individual samples and colu...
<p>These DADA2-formatted training fastas were derived from the Ribosomal Database Project (RDP Train...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
These DADA2-formatted training fasta files were derived from the Ribosomal Database Project's Traini...
Amplicon sequence variants (ASVs) and associated taxonomy called using DADA2 (v1.6.0) and Silva 16S ...
The RDP Classifier is a naive Bayesian classifier which was developed to provide rapid taxonomic pla...
Amplicon sequence variants (ASVs) and associated taxonomy called using DADA2 (v1.6.0) and Silva 16S ...
These DADA2-formatted training fasta files were derived from the Silva Project's version 138 release...
ASV feature table with SILVA taxonomic annotations. BIOM format can be easily read into R
I used a machine with Ubuntu 16.04 and DADA2 (vsn 1.5.2) to coax the Ribosomal Database Project's Tr...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
These two combined bacterial and archaeal 16S rRNA gene sequence databases were collated from variou...
<p>Sequences obtained from 16S rRNA gene libraries retrieved from environmental samples (black) and ...
These training fasta files are derived from the Silva 138.1 prokaryotic SSU taxonomic training data ...
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