Comma-separated values formatted file containing data presented in Figure 3. Columns refer to whether the population was evolved alone or in co-culture (cul, ss= single-species, co = co-culture), population (pop), transfer number (transfer), total clones tested (total_tested), total clones plasmid-free (free), total plasmid-containing clones with the focal Tn5042 insertion (p_focal_tn), total plasmid-free clones with the focal Tn5042 insertion (free_focal_tn), total plasmid-free clones with a different Tn5042 insertion (other_tn), and calculated frequencies of plasmid-free cells (free.f), plasmid-containing clones with the focal Tn5042 insertion (p_focal_tn.f), plasmid-free cells with the focal Tn5042 insertion (free_focal_tn.f), plasmid-f...
Figure S3. Indel spectrum determined by TIDE of the off-target sites compared with indel frequencies...
aPlasmid copy number (PCN) was determined after induction of the donor intron. Total genomic and pla...
Data used in Fig. 3. Pairwise population Jost’s D values for each genetic marker (MHC, mediating and...
Comma-separated values formatted file containing data presented in Figure 3. Columns refer to transf...
Comma-separated values formatted file containing data presented in Figure 1 of the manuscript. rep =...
Additional file 3: Figure S1. Growth of E. coli carrying different plasmids in minimal medium. A Com...
This comma-delimited file contains microsatellite data for 144 diploid individuals from 6 population...
Compiled table of evolved variants used to produce Figure 1. Columns refer to sample number (sample_...
These are the data from the first experiment described in the paper, with one host plant (cabbage), ...
<p>A: Percentage of colony-forming cells out of the total sorted cell population. B: Immunofluoresce...
Comma separated values formatted file containing data used to estimate gamma11, gamma12, gamma21 and...
Figure S12. Density of cells adapted to butyric acid and total cell density of the evolving replicat...
<p>Three independent cultures were used to determine the copy numbers of the chromosome and three ad...
speciescountdata.csv contains colony couts and plasmid detection from the main experiment. evonet.c...
<p><b>A.</b> Discordant fosmids selected from individual fosmid libraries shown as custom track in U...
Figure S3. Indel spectrum determined by TIDE of the off-target sites compared with indel frequencies...
aPlasmid copy number (PCN) was determined after induction of the donor intron. Total genomic and pla...
Data used in Fig. 3. Pairwise population Jost’s D values for each genetic marker (MHC, mediating and...
Comma-separated values formatted file containing data presented in Figure 3. Columns refer to transf...
Comma-separated values formatted file containing data presented in Figure 1 of the manuscript. rep =...
Additional file 3: Figure S1. Growth of E. coli carrying different plasmids in minimal medium. A Com...
This comma-delimited file contains microsatellite data for 144 diploid individuals from 6 population...
Compiled table of evolved variants used to produce Figure 1. Columns refer to sample number (sample_...
These are the data from the first experiment described in the paper, with one host plant (cabbage), ...
<p>A: Percentage of colony-forming cells out of the total sorted cell population. B: Immunofluoresce...
Comma separated values formatted file containing data used to estimate gamma11, gamma12, gamma21 and...
Figure S12. Density of cells adapted to butyric acid and total cell density of the evolving replicat...
<p>Three independent cultures were used to determine the copy numbers of the chromosome and three ad...
speciescountdata.csv contains colony couts and plasmid detection from the main experiment. evonet.c...
<p><b>A.</b> Discordant fosmids selected from individual fosmid libraries shown as custom track in U...
Figure S3. Indel spectrum determined by TIDE of the off-target sites compared with indel frequencies...
aPlasmid copy number (PCN) was determined after induction of the donor intron. Total genomic and pla...
Data used in Fig. 3. Pairwise population Jost’s D values for each genetic marker (MHC, mediating and...