Publication date
September 2015
DOIAbstract
Filter SNP (955 SNP) for 122 collected from five populations in the spring of 2014. These 955 SNP in 122 individual were used for all analyze because they had sufficient sequences and depth of reads
Filter SNP (955 SNP) for 122 collected from five populations in the spring of 2014. These 955 SNP in 122 individual were used for all analyze because they had sufficient sequences and depth of reads
Hapmap file for Solidago subsection Squarrosae filtered for SNPs present in at least 30% of samples
This file contains the filtered set of SNPs used in the study. It was derived from the UNFILTERESD_S...
<p>SNPs were identified using a Minor Allele Frequency (MAF) of 1 or 5 percent.</p
Filter SNP (955 SNP) for 122 collected from five populations in the spring of 2014. These 955 SNP in...
13,912 SNPs called in 50% of 69 individuals with no less than 95% missing data, minimum stack depth ...
Hapmap of SNPs after initial filtering. SNPs have been filtered to include 30% of all taxa, 80% of a...
<p>Comparison of SNPs recovered in this study using different thresholds of sequence coverage (4- an...
The file contains all of the SNP data used in our article. The files named HapMap.fas.txt, HapMap.hm...
For each sample of individuals, number individuals with each of the four different nucleotides at se...
Hapmap file for Solidago subsection Squarrosae filtered for SNPs present in at least 70% of samples
<p>The number of SNPs (n) which were detected individually by Refmapper and GATK are shown. The SNPs...
<p>This figure exemplifies the HapMap/1000Genomes comparison. Both, frequencies and absolute genotyp...
These SNPs were called from 109 Metchnikowia sp whole genomes mapped to MR_a10 reference genome usin...
SNP genotypes for each individual, filtered according to the parameters explained in the manuscripts...
Filtered dataset consisting of 11,408 SNPs genotyped in 185 individuals used for adaptive genetic an...
Hapmap file for Solidago subsection Squarrosae filtered for SNPs present in at least 30% of samples
This file contains the filtered set of SNPs used in the study. It was derived from the UNFILTERESD_S...
<p>SNPs were identified using a Minor Allele Frequency (MAF) of 1 or 5 percent.</p
Filter SNP (955 SNP) for 122 collected from five populations in the spring of 2014. These 955 SNP in...
13,912 SNPs called in 50% of 69 individuals with no less than 95% missing data, minimum stack depth ...
Hapmap of SNPs after initial filtering. SNPs have been filtered to include 30% of all taxa, 80% of a...
<p>Comparison of SNPs recovered in this study using different thresholds of sequence coverage (4- an...
The file contains all of the SNP data used in our article. The files named HapMap.fas.txt, HapMap.hm...
For each sample of individuals, number individuals with each of the four different nucleotides at se...
Hapmap file for Solidago subsection Squarrosae filtered for SNPs present in at least 70% of samples
<p>The number of SNPs (n) which were detected individually by Refmapper and GATK are shown. The SNPs...
<p>This figure exemplifies the HapMap/1000Genomes comparison. Both, frequencies and absolute genotyp...
These SNPs were called from 109 Metchnikowia sp whole genomes mapped to MR_a10 reference genome usin...
SNP genotypes for each individual, filtered according to the parameters explained in the manuscripts...
Filtered dataset consisting of 11,408 SNPs genotyped in 185 individuals used for adaptive genetic an...
Hapmap file for Solidago subsection Squarrosae filtered for SNPs present in at least 30% of samples
This file contains the filtered set of SNPs used in the study. It was derived from the UNFILTERESD_S...
<p>SNPs were identified using a Minor Allele Frequency (MAF) of 1 or 5 percent.</p
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