Figure S2. Scatterplots demonstrating human reads per thousand (x-axis) vs parasite reads per thousand (y-axis) for undigested samples (black), digested samples cleaned using the > 2 kb DNA cleanup protocol (red), and digested samples cleaned using the < 2 kb DNA cleanup protocol (blue). Plots demonstrate a shift in reads for all parasite species tested: (a) P. falciparum, (b) P. vivax, (c) P. ovale, (d) P. malariae, (e) P. knowlesi, (f) B. microti, (g) B. divergens, (h) B. duncani, (i) L. infantum subspecies infantum, (j) L. infantum subspecies donovani, (k) T. cruzi, (l) T. brucei subspecies rhodesiense, (m) B. malayi, (n) W. bancrofti, (o) L. loa, and (p) C. felis. (TIF 5182 kb
BACKGROUND: Targeted amplicon deep sequencing (TADS) has enabled characterization of diverse bacteri...
These extended data accompany the manuscript: Targeted Amplicon deep sequencing of ama1 and mdr1 to ...
BACKGROUND: Targeted amplicon deep sequencing (TADS) of the 16S rRNA gene is commonly used to explor...
Figure S4. Mock digestion of human blood spiked with cultured 3D7 P. falciparum-parasites confirmed ...
Figure S3. Skewed results for W. bancrofti and L. loa due to sample composition. W. bancrofti sample...
Figure S1. 18S rRNA Nucleotide alignment showing primers designed to detect a region of the gene whe...
Table S2. Genbank accession numbers of fungi tested in silico and found to be suitable candidates fo...
Table S1. Common name, scientific name and Genbank accession number of vertebrates tested in silico ...
Figure S5. 18SrRNA Nucleotide alignment showing primer binding sites and both the XmaI and BamHI res...
Integration PCRs of parasites used in this study. a Integration of SpZFN and LsZFN. PCR with P53/P54...
Table S1. Examples of genera targeted by each primer pair. Table S2. Primer characteristics of prime...
Figure S6. 18S rRNA Nucleotide alignment showing conservation of primer binding sites but not restri...
Abstract Background Targeted amplicon deep sequencing (TADS) of the 16S rRNA gene is commonly used t...
Figure S1. Clusters composed of members from a single species or six species. a) Clusters comprise P...
Additional file 1: Figure S1. A plot of primers (probes) and their binding distribution on the P. fa...
BACKGROUND: Targeted amplicon deep sequencing (TADS) has enabled characterization of diverse bacteri...
These extended data accompany the manuscript: Targeted Amplicon deep sequencing of ama1 and mdr1 to ...
BACKGROUND: Targeted amplicon deep sequencing (TADS) of the 16S rRNA gene is commonly used to explor...
Figure S4. Mock digestion of human blood spiked with cultured 3D7 P. falciparum-parasites confirmed ...
Figure S3. Skewed results for W. bancrofti and L. loa due to sample composition. W. bancrofti sample...
Figure S1. 18S rRNA Nucleotide alignment showing primers designed to detect a region of the gene whe...
Table S2. Genbank accession numbers of fungi tested in silico and found to be suitable candidates fo...
Table S1. Common name, scientific name and Genbank accession number of vertebrates tested in silico ...
Figure S5. 18SrRNA Nucleotide alignment showing primer binding sites and both the XmaI and BamHI res...
Integration PCRs of parasites used in this study. a Integration of SpZFN and LsZFN. PCR with P53/P54...
Table S1. Examples of genera targeted by each primer pair. Table S2. Primer characteristics of prime...
Figure S6. 18S rRNA Nucleotide alignment showing conservation of primer binding sites but not restri...
Abstract Background Targeted amplicon deep sequencing (TADS) of the 16S rRNA gene is commonly used t...
Figure S1. Clusters composed of members from a single species or six species. a) Clusters comprise P...
Additional file 1: Figure S1. A plot of primers (probes) and their binding distribution on the P. fa...
BACKGROUND: Targeted amplicon deep sequencing (TADS) has enabled characterization of diverse bacteri...
These extended data accompany the manuscript: Targeted Amplicon deep sequencing of ama1 and mdr1 to ...
BACKGROUND: Targeted amplicon deep sequencing (TADS) of the 16S rRNA gene is commonly used to explor...