Genomic organization of out-type T2SS in Dickeya strains. The out-type T2SS in D. fangzhongdai PA1 is at locus B6N31_15160–B6N31_15235. Blank boxes = T2SS component proteins; outS = gene encoding lipoprotein; outO = gene encoding prepilin peptidase. (TIF 498 kb
Table S1. Dickeya solani strains in this study. Table S2. Sequencing data and mappings on the Dsl 33...
GIs of D. fangzhongdai PA1 according to IslandViewer. This program integrates two sequence compositi...
Protein-based phylogenetic trees revealing Dsl 0512 as a member of in distinct sub-cluster within th...
Genomic organization of hrp-type T3SS in Dickeya strains. The hrp-type T3SS in D. fangzhongdai PA1 i...
Genomic organization of vir clusters of the T4SS in Dickeya strains. The vir cluster of the T4SS in ...
Genomic organization of effector gene clusters of the T3SS in Dickeya strains. The effector gene clu...
Phylogenetic analysis of D. fangzhongdai, D. dadantii and D. solani strains based on the protein seq...
Synteny analysis of Dickeya strains based on sequences of the flagellar-type T3SS. Strains analyzed ...
Phylogenetic analysis of Dickeya strains based on complete or draft genome sequences. Orthologous gr...
Genetic differentiation and gene flow analysis of different D. fangzhongdai subpopulations. The Chin...
A functional prediction of the genes encoded by each GI predicted in the PA1 genome. Twenty GIs were...
Table S1. T5SS and T6SS effectors present in the different Dickeya fangzhongdai genomes. (DOCX 25 kb
Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the o...
Table S4. Genes present in the JS5 strain that are absent in all other Dickeya fangzhongdai strains....
Calculation of isDDH between the genome sequences of D. fangzhongdai PA1 and other Dickeya strains. ...
Table S1. Dickeya solani strains in this study. Table S2. Sequencing data and mappings on the Dsl 33...
GIs of D. fangzhongdai PA1 according to IslandViewer. This program integrates two sequence compositi...
Protein-based phylogenetic trees revealing Dsl 0512 as a member of in distinct sub-cluster within th...
Genomic organization of hrp-type T3SS in Dickeya strains. The hrp-type T3SS in D. fangzhongdai PA1 i...
Genomic organization of vir clusters of the T4SS in Dickeya strains. The vir cluster of the T4SS in ...
Genomic organization of effector gene clusters of the T3SS in Dickeya strains. The effector gene clu...
Phylogenetic analysis of D. fangzhongdai, D. dadantii and D. solani strains based on the protein seq...
Synteny analysis of Dickeya strains based on sequences of the flagellar-type T3SS. Strains analyzed ...
Phylogenetic analysis of Dickeya strains based on complete or draft genome sequences. Orthologous gr...
Genetic differentiation and gene flow analysis of different D. fangzhongdai subpopulations. The Chin...
A functional prediction of the genes encoded by each GI predicted in the PA1 genome. Twenty GIs were...
Table S1. T5SS and T6SS effectors present in the different Dickeya fangzhongdai genomes. (DOCX 25 kb
Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the o...
Table S4. Genes present in the JS5 strain that are absent in all other Dickeya fangzhongdai strains....
Calculation of isDDH between the genome sequences of D. fangzhongdai PA1 and other Dickeya strains. ...
Table S1. Dickeya solani strains in this study. Table S2. Sequencing data and mappings on the Dsl 33...
GIs of D. fangzhongdai PA1 according to IslandViewer. This program integrates two sequence compositi...
Protein-based phylogenetic trees revealing Dsl 0512 as a member of in distinct sub-cluster within th...