Additional file 3: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Additional file 2: of Amino acid permease 3 (aap3) coding sequence as a target for Leishmania identification and diagnosis of leishmaniases using high resolution melting analysis

Karl MĂźller (5519867)
Ricardo Zampieri (811009)
Juliana Aoki (5519858)
Sandra Muxel (5519864)
Audun Nerland (5519870)
Lucile Floeter-Winter (5519861)

July 2018

Figure S2. Specificity using Cq values as parameter. Representative graph of Cq values obtained with...

Additional file 4 of High-resolution melting (HRM)-based detection of polymorphisms in the malic enzyme and glucose-6-phosphate isomerase genes for Leishmania infantum genotyping

Gloria Buffi (5229719)
Marcello Ceccarelli (522939)
Aurora Diotallevi (3569489)
Michelalberto Abruzzese (16829446)
Federica Bruno (9167541)
Germano Castelli (9167538)
Fabrizio Vitale (3569492)
Francesca Andreoni (4030070)
Daniela Bencardino (16829449)
Mauro Magnani (120149)
Luca Galluzzi (144241)

August 2023

Additional file 4: Figure S3. Specificity evaluation of primers GPIext-F/GPIext-R (a), MEint-F/ME65-...

Additional file 2: Table S2. of Detection of HPV DNA in paraffin-embedded cervical samples: a comparison of four genotyping methods

Felipe Castro (3540533)
Jill Koshiol (331281)
Wim Quint (106148)
Cosette Wheeler (3540521)
Maura Gillison (362898)
Laurence Vaughan (3540530)
Bernhard Kleter (482404)
Leen-Jan van Doorn (106150)
Anil Chaturvedi (3540524)
Allan Hildesheim (106158)
Mark Schiffman (106112)
Sophia Wang (3489836)
Rosemary Zuna (3540536)
Joan Walker (3540527)
S. Dunn (3540539)
Nicolas Wentzensen (106131)

November 2015

Human papillomavirus (HPV) genotyping reproducibility for 6 formalin-fixed and paraffin embedded (FF...

Additional file 2: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Alignment of gC genes from the detected PRV samples used for Bicolor FMCA. Strains indicated with bl...

Additional file 1: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Sensitivity of the duplex FMCA method. Melting curves from duplex FMCA with recombinant control plas...

Additional file 4: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

The Bartha-K61 strains detected in field samples were identified by PCR. The PCR results showed no f...

Additional file 5: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Influence of probe hydrolysis on the melting curve profile. (A) Melting curves and (B) Melting peaks...

Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu
Chunhong Zhang
Haiyan Shen
Junying Sun
Jianfeng Zhang

November 2018

Abstract Background Recently, pseudorabies (PR) outbreaks have been reported in a large number of sw...

Additional file 2: of Comparative genomic analyses of a virulent pseudorabies virus and a series of its in vitro passaged strains

Chao Ye (765248)
Jiqiang Wu (5590871)
Wu Tong (511519)
Tongling Shan (353279)
Xuefei Cheng (5590874)
Jingjing Xu (418877)
Chao Liang (420436)
Hao Zheng (352272)
Guoxin Li (291236)
Guangzhi Tong (280093)

December 2018

Table S2. Nucleotide variation in ORFs of F50, F91, F120 compared to JS-2012. (DOCX 16 kb

Additional file 4: Figure S1. of Detection of genetic variation using dual-labeled peptide nucleic acid (PNA) probe-based melting point analysis

Deokhwe Hur (3504872)
Myoung Kim (1569049)
Minsik Song (3504869)
Jinwook Jung (187991)
Heekyung Park (3504875)

November 2015

Real-time PCR run information. Melting point analysis and/or PCR amplification signals were conducte...

Additional file 3: Figure S1. of SYBR green-based one step quantitative real-time polymerase chain reaction assay for the detection of Zika virus in field-caught mosquitoes

Wei-Ping Tien (4447369)
Gareth Lim (4447366)
Gladys Yeo (113330)
Suzanna Chiang (4447363)
Chee-Seng Chong (440652)
Lee-Ching Ng (221663)
Hapuarachchige Hapuarachchi (3802921)

September 2017

Melting curve analysis demonstrating the non-specific amplification by primer combinations F + R3, F...

Additional file 1: of Genetic detection of peste des petits ruminants virus under field conditions: a step forward towards disease eradication

Waqas Ashraf (3696100)
Hermann Unger (358853)
Sunaina Haris (3696106)
Ameena Mobeen (3696097)
Muhammad Farooq (186443)
Muhammad Asif (466310)
Qaiser Khan (3696103)

January 2017

Detection limit of N-gene based RT-LAMP assay. Sheet 1; The excel file includes data as values of mi...

Additional file 3 of High-resolution melting (HRM)-based detection of polymorphisms in the malic enzyme and glucose-6-phosphate isomerase genes for Leishmania infantum genotyping

Gloria Buffi (5229719)
Marcello Ceccarelli (522939)
Aurora Diotallevi (3569489)
Michelalberto Abruzzese (16829446)
Federica Bruno (9167541)
Germano Castelli (9167538)
Fabrizio Vitale (3569492)
Francesca Andreoni (4030070)
Daniela Bencardino (16829449)
Mauro Magnani (120149)
Luca Galluzzi (144241)

August 2023

Additional file 3: Figure S2. Sequence of L. infantum MHOM/FR/78/LEM75 (AJ620617.1) GPI gene and pri...

Additional file 1: of Highly sensitive detection of ALK resistance mutations in plasma using droplet digital PCR

Ryohei Yoshida (5990975)
Takaaki Sasaki (1277619)
Yasuhiro Umekage (5990978)
Sachie Tanno (5990981)
Yusuke Ono (149099)
Munehiko Ogata (5990984)
Shinichi Chiba (5990987)
Yusuke Mizukami (254859)
Yoshinobu Ohsaki (5990990)

November 2018

Table S1. Reaction mixtures. (A) Screening assay. (B) Mutant specific assay. Table S2. Thermal cycli...

Additional file 2: of Influence of cell type and cell culture media on the propagation of foot-and-mouth disease virus with regard to vaccine quality

Veronika Dill (4972621)
Bernd Hoffmann (191620)
Aline Zimmer (4972624)
Martin Beer (222377)
Michael Eschbaumer (249786)

March 2018

Table S2. In-silico analysis covering possible additional vaccine strains (A) and most topotypes wit...

Additional file 2: of Amino acid permease 3 (aap3) coding sequence as a target for Leishmania identification and diagnosis of leishmaniases using high resolution melting analysis

Karl MĂźller (5519867)
Ricardo Zampieri (811009)
Juliana Aoki (5519858)
Sandra Muxel (5519864)
Audun Nerland (5519870)
Lucile Floeter-Winter (5519861)

July 2018

Figure S2. Specificity using Cq values as parameter. Representative graph of Cq values obtained with...

Additional file 4 of High-resolution melting (HRM)-based detection of polymorphisms in the malic enzyme and glucose-6-phosphate isomerase genes for Leishmania infantum genotyping

Gloria Buffi (5229719)
Marcello Ceccarelli (522939)
Aurora Diotallevi (3569489)
Michelalberto Abruzzese (16829446)
Federica Bruno (9167541)
Germano Castelli (9167538)
Fabrizio Vitale (3569492)
Francesca Andreoni (4030070)
Daniela Bencardino (16829449)
Mauro Magnani (120149)
Luca Galluzzi (144241)

August 2023

Additional file 4: Figure S3. Specificity evaluation of primers GPIext-F/GPIext-R (a), MEint-F/ME65-...

Additional file 2: Table S2. of Detection of HPV DNA in paraffin-embedded cervical samples: a comparison of four genotyping methods

Felipe Castro (3540533)
Jill Koshiol (331281)
Wim Quint (106148)
Cosette Wheeler (3540521)
Maura Gillison (362898)
Laurence Vaughan (3540530)
Bernhard Kleter (482404)
Leen-Jan van Doorn (106150)
Anil Chaturvedi (3540524)
Allan Hildesheim (106158)
Mark Schiffman (106112)
Sophia Wang (3489836)
Rosemary Zuna (3540536)
Joan Walker (3540527)
S. Dunn (3540539)
Nicolas Wentzensen (106131)

November 2015

Human papillomavirus (HPV) genotyping reproducibility for 6 formalin-fixed and paraffin embedded (FF...

Additional file 2: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Alignment of gC genes from the detected PRV samples used for Bicolor FMCA. Strains indicated with bl...

Additional file 1: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Sensitivity of the duplex FMCA method. Melting curves from duplex FMCA with recombinant control plas...

Additional file 4: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

The Bartha-K61 strains detected in field samples were identified by PCR. The PCR results showed no f...

Additional file 5: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu (587903)
Chunhong Zhang (1887235)
Haiyan Shen (6021257)
Junying Sun (443988)
Jianfeng Zhang (219107)

November 2018

Influence of probe hydrolysis on the melting curve profile. (A) Melting curves and (B) Melting peaks...

Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Zhicheng Liu
Chunhong Zhang
Haiyan Shen
Junying Sun
Jianfeng Zhang

November 2018

Abstract Background Recently, pseudorabies (PR) outbreaks have been reported in a large number of sw...

Additional file 2: of Comparative genomic analyses of a virulent pseudorabies virus and a series of its in vitro passaged strains

Chao Ye (765248)
Jiqiang Wu (5590871)
Wu Tong (511519)
Tongling Shan (353279)
Xuefei Cheng (5590874)
Jingjing Xu (418877)
Chao Liang (420436)
Hao Zheng (352272)
Guoxin Li (291236)
Guangzhi Tong (280093)

December 2018

Table S2. Nucleotide variation in ORFs of F50, F91, F120 compared to JS-2012. (DOCX 16 kb

Additional file 4: Figure S1. of Detection of genetic variation using dual-labeled peptide nucleic acid (PNA) probe-based melting point analysis

Deokhwe Hur (3504872)
Myoung Kim (1569049)
Minsik Song (3504869)
Jinwook Jung (187991)
Heekyung Park (3504875)

November 2015

Real-time PCR run information. Melting point analysis and/or PCR amplification signals were conducte...

Additional file 3: Figure S1. of SYBR green-based one step quantitative real-time polymerase chain reaction assay for the detection of Zika virus in field-caught mosquitoes

Wei-Ping Tien (4447369)
Gareth Lim (4447366)
Gladys Yeo (113330)
Suzanna Chiang (4447363)
Chee-Seng Chong (440652)
Lee-Ching Ng (221663)
Hapuarachchige Hapuarachchi (3802921)

September 2017

Melting curve analysis demonstrating the non-specific amplification by primer combinations F + R3, F...

Additional file 1: of Genetic detection of peste des petits ruminants virus under field conditions: a step forward towards disease eradication

Waqas Ashraf (3696100)
Hermann Unger (358853)
Sunaina Haris (3696106)
Ameena Mobeen (3696097)
Muhammad Farooq (186443)
Muhammad Asif (466310)
Qaiser Khan (3696103)

January 2017

Detection limit of N-gene based RT-LAMP assay. Sheet 1; The excel file includes data as values of mi...

Additional file 3 of High-resolution melting (HRM)-based detection of polymorphisms in the malic enzyme and glucose-6-phosphate isomerase genes for Leishmania infantum genotyping

Gloria Buffi (5229719)
Marcello Ceccarelli (522939)
Aurora Diotallevi (3569489)
Michelalberto Abruzzese (16829446)
Federica Bruno (9167541)
Germano Castelli (9167538)
Fabrizio Vitale (3569492)
Francesca Andreoni (4030070)
Daniela Bencardino (16829449)
Mauro Magnani (120149)
Luca Galluzzi (144241)

August 2023

Additional file 3: Figure S2. Sequence of L. infantum MHOM/FR/78/LEM75 (AJ620617.1) GPI gene and pri...

Additional file 1: of Highly sensitive detection of ALK resistance mutations in plasma using droplet digital PCR

Ryohei Yoshida (5990975)
Takaaki Sasaki (1277619)
Yasuhiro Umekage (5990978)
Sachie Tanno (5990981)
Yusuke Ono (149099)
Munehiko Ogata (5990984)
Shinichi Chiba (5990987)
Yusuke Mizukami (254859)
Yoshinobu Ohsaki (5990990)

November 2018

Table S1. Reaction mixtures. (A) Screening assay. (B) Mutant specific assay. Table S2. Thermal cycli...

Additional file 2: of Influence of cell type and cell culture media on the propagation of foot-and-mouth disease virus with regard to vaccine quality

Veronika Dill (4972621)
Bernd Hoffmann (191620)
Aline Zimmer (4972624)
Martin Beer (222377)
Michael Eschbaumer (249786)

March 2018

Table S2. In-silico analysis covering possible additional vaccine strains (A) and most topotypes wit...

Additional file 2: of Amino acid permease 3 (aap3) coding sequence as a target for Leishmania identification and diagnosis of leishmaniases using high resolution melting analysis

Karl MĂźller (5519867)
Ricardo Zampieri (811009)
Juliana Aoki (5519858)
Sandra Muxel (5519864)
Audun Nerland (5519870)
Lucile Floeter-Winter (5519861)

July 2018

Figure S2. Specificity using Cq values as parameter. Representative graph of Cq values obtained with...

Additional file 4 of High-resolution melting (HRM)-based detection of polymorphisms in the malic enzyme and glucose-6-phosphate isomerase genes for Leishmania infantum genotyping

Gloria Buffi (5229719)
Marcello Ceccarelli (522939)
Aurora Diotallevi (3569489)
Michelalberto Abruzzese (16829446)
Federica Bruno (9167541)
Germano Castelli (9167538)
Fabrizio Vitale (3569492)
Francesca Andreoni (4030070)
Daniela Bencardino (16829449)
Mauro Magnani (120149)
Luca Galluzzi (144241)

August 2023

Additional file 4: Figure S3. Specificity evaluation of primers GPIext-F/GPIext-R (a), MEint-F/ME65-...

Additional file 2: Table S2. of Detection of HPV DNA in paraffin-embedded cervical samples: a comparison of four genotyping methods

Felipe Castro (3540533)
Jill Koshiol (331281)
Wim Quint (106148)
Cosette Wheeler (3540521)
Maura Gillison (362898)
Laurence Vaughan (3540530)
Bernhard Kleter (482404)
Leen-Jan van Doorn (106150)
Anil Chaturvedi (3540524)
Allan Hildesheim (106158)
Mark Schiffman (106112)
Sophia Wang (3489836)
Rosemary Zuna (3540536)
Joan Walker (3540527)
S. Dunn (3540539)
Nicolas Wentzensen (106131)

November 2015

Human papillomavirus (HPV) genotyping reproducibility for 6 formalin-fixed and paraffin embedded (FF...

Additional file 3: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Abstract

Extracted data

Additional file 3: of Duplex fluorescence melting curve analysis as a new tool for rapid detection and differentiation of genotype I, II and Bartha-K61 vaccine strains of pseudorabies virus

Abstract

Extracted data

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