Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

January 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Additional file 5: Table S3. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Lists of DE miRNAs found in pregnant and cyclic endometria on different days of the estrous cycle an...

Additional file 14: Tables S18, S19, S20 and S21. of Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle

Gabriella Oliveira (4837605)
Luciana Regitano (3407810)
Aline Cesar (3508628)
James Reecy (3561878)
Karina Degaki (4837602)
Mirele Poleti (3583997)
Andrezza Felício (3584003)
James Koltes (3570086)
Luiz Coutinho (3508640)

February 2018

Gene ontology (GO) enrichment analysis by Cytoscape of genes in mRNA modules negatively correlated w...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S9. List of canonical pathways predicted for C24MC-associated miRNAs with IPA. (XLS 41 kb

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S7. List of putative target mRNAs for analyzed miRNAs and their expression values (FPKM) durin...

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Additional file 3: Table S2. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of sequences annotated and not annotated to known porcine and mammalian miRNAs. In total, 873 s...

Additional file 4: of Circulating miRNA signatures of early pregnancy in cattle

Jason Ioannidis (3164142)
F. Xavier Donadeu (3164145)

March 2016

Differences in miRNA levels validated by qPCR. List of differences (P < 0.05) in miRNA abundance obt...

Additional file 5: Table S4. of Novel equine tissue miRNAs and breed-related miRNA expressed in serum

Alicja Pacholewska (705841)
NĂşria Mach (3440864)
Xavier Mata (335075)
Anne Vaiman (335079)
Laurent Schibler (47268)
Eric Barrey (219804)
Vincent Gerber (171558)

October 2016

Differentially expressed miRNAs in pony serum compare to Warmbloods. An Excel table with log 2 fold ...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare.

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

December 2018

BackgroundThe human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster a...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

January 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Additional file 5: Table S3. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Lists of DE miRNAs found in pregnant and cyclic endometria on different days of the estrous cycle an...

Additional file 14: Tables S18, S19, S20 and S21. of Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle

Gabriella Oliveira (4837605)
Luciana Regitano (3407810)
Aline Cesar (3508628)
James Reecy (3561878)
Karina Degaki (4837602)
Mirele Poleti (3583997)
Andrezza Felício (3584003)
James Koltes (3570086)
Luiz Coutinho (3508640)

February 2018

Gene ontology (GO) enrichment analysis by Cytoscape of genes in mRNA modules negatively correlated w...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S9. List of canonical pathways predicted for C24MC-associated miRNAs with IPA. (XLS 41 kb

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S7. List of putative target mRNAs for analyzed miRNAs and their expression values (FPKM) durin...

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Additional file 3: Table S2. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of sequences annotated and not annotated to known porcine and mammalian miRNAs. In total, 873 s...

Additional file 4: of Circulating miRNA signatures of early pregnancy in cattle

Jason Ioannidis (3164142)
F. Xavier Donadeu (3164145)

March 2016

Differences in miRNA levels validated by qPCR. List of differences (P < 0.05) in miRNA abundance obt...

Additional file 5: Table S4. of Novel equine tissue miRNAs and breed-related miRNA expressed in serum

Alicja Pacholewska (705841)
NĂşria Mach (3440864)
Xavier Mata (335075)
Anne Vaiman (335079)
Laurent Schibler (47268)
Eric Barrey (219804)
Vincent Gerber (171558)

October 2016

Differentially expressed miRNAs in pony serum compare to Warmbloods. An Excel table with log 2 fold ...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare.

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

December 2018

BackgroundThe human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster a...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

January 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Additional file 5: Table S3. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Lists of DE miRNAs found in pregnant and cyclic endometria on different days of the estrous cycle an...

Additional file 14: Tables S18, S19, S20 and S21. of Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle

Gabriella Oliveira (4837605)
Luciana Regitano (3407810)
Aline Cesar (3508628)
James Reecy (3561878)
Karina Degaki (4837602)
Mirele Poleti (3583997)
Andrezza Felício (3584003)
James Koltes (3570086)
Luiz Coutinho (3508640)

February 2018

Gene ontology (GO) enrichment analysis by Cytoscape of genes in mRNA modules negatively correlated w...

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

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