Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Additional file 1: Table S1. of MicroRNA profiles reveal female allotetraploid hybrid fertility

Rong Zhou (138287)
Yanhong Wu (312308)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

October 2015

Data statistics of samples. Table S2. Classify annotation of clean reads. Table S3. Actual reads cou...

Additional file 8: Table S5. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with DE miRNAs between different days o...

Additional file 9: Table S6. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with common targets for canonical miR-1...

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S1. Comparative list of C14MC associated-miRNAs among different species. The comparative list ...

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S7. List of putative target mRNAs for analyzed miRNAs and their expression values (FPKM) durin...

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

January 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare.

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

December 2018

BackgroundThe human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster a...

Additional file 9: of A mathematical model as a tool to identify microRNAs with highest impact on transcriptome changes

Marzena Mura (6309653)
Roman Jaksik (6309656)
Anna Lalik (6309659)
Krzysztof Biernacki (1695766)
Marek Kimmel (39636)
Joanna Rzeszowska-Wolny (286036)
Krzysztof Fujarewicz (286030)

February 2019

Table S4. KEGG pathways identified for 30 top-rank miRNAs in Me45 cell line. (XLSX 12 kb

Kinetics of the Chromosome 14 MicroRNA Cluster Ortholog and Its Potential Role During Placental Development in the Pregnant Mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C.
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E.
Ball, Barry A.

December 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Additional file 1: Table S1. of MicroRNA profiles reveal female allotetraploid hybrid fertility

Rong Zhou (138287)
Yanhong Wu (312308)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

October 2015

Data statistics of samples. Table S2. Classify annotation of clean reads. Table S3. Actual reads cou...

Additional file 8: Table S5. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with DE miRNAs between different days o...

Additional file 9: Table S6. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with common targets for canonical miR-1...

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S1. Comparative list of C14MC associated-miRNAs among different species. The comparative list ...

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S7. List of putative target mRNAs for analyzed miRNAs and their expression values (FPKM) durin...

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

January 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare.

Dini, Pouya
Daels, Peter
Loux, Shavahn C
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E
Ball, Barry A

December 2018

BackgroundThe human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster a...

Additional file 9: of A mathematical model as a tool to identify microRNAs with highest impact on transcriptome changes

Marzena Mura (6309653)
Roman Jaksik (6309656)
Anna Lalik (6309659)
Krzysztof Biernacki (1695766)
Marek Kimmel (39636)
Joanna Rzeszowska-Wolny (286036)
Krzysztof Fujarewicz (286030)

February 2019

Table S4. KEGG pathways identified for 30 top-rank miRNAs in Me45 cell line. (XLSX 12 kb

Kinetics of the Chromosome 14 MicroRNA Cluster Ortholog and Its Potential Role During Placental Development in the Pregnant Mare

Dini, Pouya
Daels, Peter
Loux, Shavahn C.
Esteller-Vico, Alejandro
Carossino, Mariano
Scoggin, Kirsten E.
Ball, Barry A.

December 2018

Background: The human chromosome 14 microRNA cluster (C14MC) is a conserved microRNA (miRNA) cluster...

Additional file 1: Table S1. of MicroRNA profiles reveal female allotetraploid hybrid fertility

Rong Zhou (138287)
Yanhong Wu (312308)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

October 2015

Data statistics of samples. Table S2. Classify annotation of clean reads. Table S3. Actual reads cou...

Additional file 8: Table S5. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with DE miRNAs between different days o...

Additional file 9: Table S6. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with common targets for canonical miR-1...

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

Related items

Related items