Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Additional file 5: Fig. S1. of Genome-wide microRNA expression profiling in placentae from frozen-thawed blastocyst transfer

Hitoshi Hiura (673322)
Hiromitsu Hattori (4331434)
Norio Kobayashi (2257063)
Hiroaki Okae (673321)
Hatsune Chiba (404149)
Naoko Miyauchi (4331437)
Akane Kitamura (4331431)
Hiroyuki Kikuchi (673326)
Hiroaki Yoshida (673327)
Takahiro Arima (8232)

August 2017

Validation of placental miRNAs expression using qRT-PCR. The boxplots show the expression levels of ...

Additional file 3: Table S2. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of sequences annotated and not annotated to known porcine and mammalian miRNAs. In total, 873 s...

Additional file 4: of Circulating miRNA signatures of early pregnancy in cattle

Jason Ioannidis (3164142)
F. Xavier Donadeu (3164145)

March 2016

Differences in miRNA levels validated by qPCR. List of differences (P < 0.05) in miRNA abundance obt...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S1. Comparative list of C14MC associated-miRNAs among different species. The comparative list ...

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S9. List of canonical pathways predicted for C24MC-associated miRNAs with IPA. (XLS 41 kb

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Additional file 1: Table S1. of MicroRNA profiles reveal female allotetraploid hybrid fertility

Rong Zhou (138287)
Yanhong Wu (312308)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

October 2015

Data statistics of samples. Table S2. Classify annotation of clean reads. Table S3. Actual reads cou...

Additional file 5: Table S3. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Lists of DE miRNAs found in pregnant and cyclic endometria on different days of the estrous cycle an...

Additional file 8: Table S5. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with DE miRNAs between different days o...

Additional file 1: Table S1. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Average values representing read counts after subsequent steps of pre-analysis of raw data obtained ...

Additional file 5: Fig. S1. of Genome-wide microRNA expression profiling in placentae from frozen-thawed blastocyst transfer

Hitoshi Hiura (673322)
Hiromitsu Hattori (4331434)
Norio Kobayashi (2257063)
Hiroaki Okae (673321)
Hatsune Chiba (404149)
Naoko Miyauchi (4331437)
Akane Kitamura (4331431)
Hiroyuki Kikuchi (673326)
Hiroaki Yoshida (673327)
Takahiro Arima (8232)

August 2017

Validation of placental miRNAs expression using qRT-PCR. The boxplots show the expression levels of ...

Additional file 3: Table S2. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of sequences annotated and not annotated to known porcine and mammalian miRNAs. In total, 873 s...

Additional file 4: of Circulating miRNA signatures of early pregnancy in cattle

Jason Ioannidis (3164142)
F. Xavier Donadeu (3164145)

March 2016

Differences in miRNA levels validated by qPCR. List of differences (P < 0.05) in miRNA abundance obt...

Additional file 4: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S4. Differential expression analysis results for C24MC-associated miRNAs during gestation, gen...

Additional file 3: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S3. Normalized read count for C24MC-associated miRNAs generated with Illumina miRNA-sequencing...

Additional file 6: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S6. Read counts and mapping quality of Illumina RNA-sequencing dataset from CAM at different s...

Additional file 1: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S1. Comparative list of C14MC associated-miRNAs among different species. The comparative list ...

Additional file 8: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S8. List of disease and physiological functions predicted for C24MC-associated miRNAs with IPA...

Additional file 9: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S9. List of canonical pathways predicted for C24MC-associated miRNAs with IPA. (XLS 41 kb

Additional file 5: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Pouya Dini (6109472)
Peter Daels (6109475)
Shavahn Loux (6109478)
Alejandro Esteller-Vico (6109481)
Mariano Carossino (4705678)
Kirsten Scoggin (6109484)
Barry Ball (6109487)

December 2018

Table S5. Primer sequences for genes which were indicated in our dataset to be involved in angiogene...

Additional file 7: Table S4. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of DE miRNAs found in pregnant and cyclic endometria organized into 7 clusters according to the...

Additional file 1: Table S1. of MicroRNA profiles reveal female allotetraploid hybrid fertility

Rong Zhou (138287)
Yanhong Wu (312308)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

October 2015

Data statistics of samples. Table S2. Classify annotation of clean reads. Table S3. Actual reads cou...

Additional file 5: Table S3. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Lists of DE miRNAs found in pregnant and cyclic endometria on different days of the estrous cycle an...

Additional file 8: Table S5. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Results of IPA functional annotations and processes enriched with DE miRNAs between different days o...

Additional file 1: Table S1. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

Average values representing read counts after subsequent steps of pre-analysis of raw data obtained ...

Additional file 5: Fig. S1. of Genome-wide microRNA expression profiling in placentae from frozen-thawed blastocyst transfer

Hitoshi Hiura (673322)
Hiromitsu Hattori (4331434)
Norio Kobayashi (2257063)
Hiroaki Okae (673321)
Hatsune Chiba (404149)
Naoko Miyauchi (4331437)
Akane Kitamura (4331431)
Hiroyuki Kikuchi (673326)
Hiroaki Yoshida (673327)
Takahiro Arima (8232)

August 2017

Validation of placental miRNAs expression using qRT-PCR. The boxplots show the expression levels of ...

Additional file 3: Table S2. of Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Kamil Krawczynski (3581273)
Stefan Bauersachs (130224)
Zaneta Reliszko (3581276)
Alexander Graf (157514)
Monika Kaczmarek (3580151)

November 2015

List of sequences annotated and not annotated to known porcine and mammalian miRNAs. In total, 873 s...

Additional file 4: of Circulating miRNA signatures of early pregnancy in cattle

Jason Ioannidis (3164142)
F. Xavier Donadeu (3164145)

March 2016

Differences in miRNA levels validated by qPCR. List of differences (P < 0.05) in miRNA abundance obt...

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

Additional file 7: of Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare

Abstract

Extracted data

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