Additional file 4: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Additional file 1 of The succession pattern of soil microbial communities and its relationship with tobacco bacterial wilt

Jiaojiao Niu (3399815)
Zhongwen Rang (3529211)
Chao Zhang (51048)
Wu Chen (569414)
Feng Tian (121350)
Huaqun Yin (519037)
Linjian Dai (3529214)

October 2016

Figure S1. Rarefaction curves of 16r RNA gene sequencing data. Figure S2. Composition and structure ...

Determination of factors associated with natural soil suppressivity to potato common scab.

Marketa Sagova-Mareckova
Ondrej Daniel
Marek Omelka
Vaclav Kristufek
Jiri Divis
Jan Kopecky

Common scab of potatoes is a disease, which is difficult to manage due to complex interactions of th...

Additional file 3: of Metagenome-scale analysis yields insights into the structure and function of microbial communities in a copper bioleaching heap

Xian Zhang (191440)
Jiaojiao Niu (3399815)
Yili Liang (234215)
Xueduan Liu (519039)
Huaqun Yin (519037)

January 2016

The viral composition in the metagenome collected from bioleaching heap. (TIF 423 kb

Additional file 5: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Relative abundance of the metagenomic bacterial taxonomic profiling (at genus level) (separated from...

Additional file 7: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Estimated absolute abundance (EAA) of the metagenomic bacterial taxonomic profiling (at genus level)...

Additional file 8: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Relative abundance of the metagenomic microbial function profiling (KEGG orthology function category...

Additional file 3: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Sequence read numbers of the bacterial OTUs profiling (sequenced on a MiSeq PE250 sequencer at a dep...

Additional file 1: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Figure S1. Summary of sampling in this study. The sampling field (34.248727°N, 119.816724°E, 22.9 m ...

The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi
Mingcong Li
Guangshan Wei
Renmao Tian
Cuiping Li
Bing Wang
Rongshan Lin
Chunyu Shi
Xiuli Chi
Bo Zhou
Zheng Gao

February 2019

Abstract Background Soil microorganisms can mediate the occurrence of plant diseases. Potato common ...

Community Analysis of Root- and Tuber-Associated Bacteria in Field-Grown Potato Plants Harboring Different Resistance Levels against Common Scab

Akira Kobayashi
Yuki Ohdaira Kobayashi
Nobutaka Someya
Seishi Ikeda

January 2015

Eight genotypes of potato plants with different resistance levels against common scab were grown in ...

The divergence of bacterial communities among continuous cropping, rotational cropping and new planting potato soils

Qiulong HU

October 2019

Figure S1: Rarefaction curves of soil bacteria in CC, RC and NP potato soils, Table S1: Dissimilarit...

Data from: Determination of factors associated with natural soil suppressivity to potato common scab

Sagova-Mareckova, Marketa
Daniel, Ondrej
Omelka, Marek
Kristufek, Vaclav
Divis, Jiri
Kopecky, Jan

January 2015

Common scab of potatoes is a disease, which is difficult to manage due to complex interactions of th...

Additional file 2: of Spatial segregation of the biological soil crust microbiome around its foundational cyanobacterium, Microcoleus vaginatus, and the formation of a nitrogen-fixing cyanosphere

Estelle Couradeau (192890)
Ana Giraldo-Silva (6553622)
Francesca De Martini (6553625)
Ferran Garcia-Pichel (257121)

April 2019

Table S1. Summary of SSU rRNA gene libraries analyzed from HSN and FB sample set and associated cove...

Additional file 7: Table S3. of Temporal dynamics in microbial soil communities at anthrax carcass sites

Karoline Valseth (4470688)
Camilla NesbĂ¸ (4470682)
W. Easterday (4470679)
Wendy Turner (4470673)
Jaran Olsen (4470685)
Nils Stenseth (4470676)
Thomas Haverkamp (4470691)

September 2017

Comparison of taxonomic classification with four different methods: MetaBIT, Metaxa2, MEGAN, and Kra...

Soil microbial communities in agroecosystems and natural habitats contributing to resistance and resilience of the soil environment

Sarikhani, Ensyeh

January 2020

Ensyeh Sarikhani Soil microbial communities in agroecosystems and natural habitats contributing to r...

Additional file 1 of The succession pattern of soil microbial communities and its relationship with tobacco bacterial wilt

Jiaojiao Niu (3399815)
Zhongwen Rang (3529211)
Chao Zhang (51048)
Wu Chen (569414)
Feng Tian (121350)
Huaqun Yin (519037)
Linjian Dai (3529214)

October 2016

Figure S1. Rarefaction curves of 16r RNA gene sequencing data. Figure S2. Composition and structure ...

Determination of factors associated with natural soil suppressivity to potato common scab.

Marketa Sagova-Mareckova
Ondrej Daniel
Marek Omelka
Vaclav Kristufek
Jiri Divis
Jan Kopecky

Common scab of potatoes is a disease, which is difficult to manage due to complex interactions of th...

Additional file 3: of Metagenome-scale analysis yields insights into the structure and function of microbial communities in a copper bioleaching heap

Xian Zhang (191440)
Jiaojiao Niu (3399815)
Yili Liang (234215)
Xueduan Liu (519039)
Huaqun Yin (519037)

January 2016

The viral composition in the metagenome collected from bioleaching heap. (TIF 423 kb

Additional file 5: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Relative abundance of the metagenomic bacterial taxonomic profiling (at genus level) (separated from...

Additional file 7: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Estimated absolute abundance (EAA) of the metagenomic bacterial taxonomic profiling (at genus level)...

Additional file 8: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Relative abundance of the metagenomic microbial function profiling (KEGG orthology function category...

Additional file 3: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Sequence read numbers of the bacterial OTUs profiling (sequenced on a MiSeq PE250 sequencer at a dep...

Additional file 1: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi (6289784)
Mingcong Li (795131)
Guangshan Wei (795132)
Renmao Tian (3244935)
Cuiping Li (671025)
Bing Wang (126120)
Rongshan Lin (6289787)
Chunyu Shi (179082)
Xiuli Chi (6289790)
Bo Zhou (15092)
Zheng Gao (592134)

February 2019

Figure S1. Summary of sampling in this study. The sampling field (34.248727°N, 119.816724°E, 22.9 m ...

The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Wencong Shi
Mingcong Li
Guangshan Wei
Renmao Tian
Cuiping Li
Bing Wang
Rongshan Lin
Chunyu Shi
Xiuli Chi
Bo Zhou
Zheng Gao

February 2019

Abstract Background Soil microorganisms can mediate the occurrence of plant diseases. Potato common ...

Community Analysis of Root- and Tuber-Associated Bacteria in Field-Grown Potato Plants Harboring Different Resistance Levels against Common Scab

Akira Kobayashi
Yuki Ohdaira Kobayashi
Nobutaka Someya
Seishi Ikeda

January 2015

Eight genotypes of potato plants with different resistance levels against common scab were grown in ...

The divergence of bacterial communities among continuous cropping, rotational cropping and new planting potato soils

Qiulong HU

October 2019

Figure S1: Rarefaction curves of soil bacteria in CC, RC and NP potato soils, Table S1: Dissimilarit...

Data from: Determination of factors associated with natural soil suppressivity to potato common scab

Sagova-Mareckova, Marketa
Daniel, Ondrej
Omelka, Marek
Kristufek, Vaclav
Divis, Jiri
Kopecky, Jan

January 2015

Common scab of potatoes is a disease, which is difficult to manage due to complex interactions of th...

Additional file 2: of Spatial segregation of the biological soil crust microbiome around its foundational cyanobacterium, Microcoleus vaginatus, and the formation of a nitrogen-fixing cyanosphere

Estelle Couradeau (192890)
Ana Giraldo-Silva (6553622)
Francesca De Martini (6553625)
Ferran Garcia-Pichel (257121)

April 2019

Table S1. Summary of SSU rRNA gene libraries analyzed from HSN and FB sample set and associated cove...

Additional file 7: Table S3. of Temporal dynamics in microbial soil communities at anthrax carcass sites

Karoline Valseth (4470688)
Camilla NesbĂ¸ (4470682)
W. Easterday (4470679)
Wendy Turner (4470673)
Jaran Olsen (4470685)
Nils Stenseth (4470676)
Thomas Haverkamp (4470691)

September 2017

Comparison of taxonomic classification with four different methods: MetaBIT, Metaxa2, MEGAN, and Kra...

Soil microbial communities in agroecosystems and natural habitats contributing to resistance and resilience of the soil environment

Sarikhani, Ensyeh

January 2020

Ensyeh Sarikhani Soil microbial communities in agroecosystems and natural habitats contributing to r...

Additional file 1 of The succession pattern of soil microbial communities and its relationship with tobacco bacterial wilt

Jiaojiao Niu (3399815)
Zhongwen Rang (3529211)
Chao Zhang (51048)
Wu Chen (569414)
Feng Tian (121350)
Huaqun Yin (519037)
Linjian Dai (3529214)

October 2016

Figure S1. Rarefaction curves of 16r RNA gene sequencing data. Figure S2. Composition and structure ...

Determination of factors associated with natural soil suppressivity to potato common scab.

Marketa Sagova-Mareckova
Ondrej Daniel
Marek Omelka
Vaclav Kristufek
Jiri Divis
Jan Kopecky

Common scab of potatoes is a disease, which is difficult to manage due to complex interactions of th...

Additional file 3: of Metagenome-scale analysis yields insights into the structure and function of microbial communities in a copper bioleaching heap

Xian Zhang (191440)
Jiaojiao Niu (3399815)
Yili Liang (234215)
Xueduan Liu (519039)
Huaqun Yin (519037)

January 2016

The viral composition in the metagenome collected from bioleaching heap. (TIF 423 kb

Additional file 4: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Abstract

Extracted data

Additional file 4: of The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Abstract

Extracted data

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