(A) Labeled WT and Mut oligos of the second binding site (+113/+122) on the 5’ UTR are shown in lane 1 and 3. In the presence of Elk1-db, clear complex formation of Elk1-db and WT probe is observed (lane 2). Also, there is no shift in the reaction in which Mut probe is incubated with Elk1-db (lane 4) and competition (lane 5), as expected. (B) Either WT or Mut oligonucleotides of the third putative binding site (+253/+262) could not participate in any complex formation with Elk1-db protein (lane 2 and 4, respectively). Lane 1 and 3 represent WT and Mut probes both of which lack Elk1-db, and positive control reaction is indicated in lane 6. (C) Biotin-labeled WT and Mut probes of the predicted promoter binding site (-428/-419) are loaded as c...
<p>The gene names are indicated at the bottom of each panel. They are <i>PRP1</i> (A), <i>RHS19</i> ...
<p>Double stranded oligonucleotides with Mef2 consensus sequences were designed to test SmMef2 bindi...
<p>Upper panel represents schematic illustration of putative GLI binding sites. Positions relative t...
<p>(A) Lanes 1 and 2 indicating the mobilities of labeled, biotinylated oligonucleotides (A33 and G3...
<p>Oligonucleotide containing Elk1 binding site on <i>KATNB1</i> promoter underlined and named as El...
(A) Unmethylated biotin-labeled WT oligonucleotide including +113/+122 Elk1 binding site on KATNA1 i...
<p><b>Panel (A)</b>: Shows the EMSA experiments to evaluate the specificity of the Oligo – Nuclear p...
<p><b>A.</b> 5′-end biotin-labeled double-stranded oligonucleotides probes including −462 G (lane 1–...
<p>(A) Schematic overview of the MIA/CD-RAP-dependent region between −7079 and −7038 bp, highlighted...
<p><b>Panel (A)</b>: Shows the EMSA experiments carried out to assess the displacement of the probe ...
<p>The respective MST binding curves are plotted on the left, the fluorescence channel depicting the...
<p>(<b>A</b>) Overview of oligonucleotides used for EMSA. LKB1 DSE: downstream element, position +35...
<p>CK, blank control; S1-3, sample 1–3; g. -963A, g. -963C showed that EMSA with wt and mutant oligo...
<p>All samples contained binding buffer (1.5 µL), Poly dI:dC (1.5 µL), G allele or A allele probe (0...
<p>A. EMSA analysis of TFAM binding to double-stranded oligonucleotide probes containing the C295T m...
<p>The gene names are indicated at the bottom of each panel. They are <i>PRP1</i> (A), <i>RHS19</i> ...
<p>Double stranded oligonucleotides with Mef2 consensus sequences were designed to test SmMef2 bindi...
<p>Upper panel represents schematic illustration of putative GLI binding sites. Positions relative t...
<p>(A) Lanes 1 and 2 indicating the mobilities of labeled, biotinylated oligonucleotides (A33 and G3...
<p>Oligonucleotide containing Elk1 binding site on <i>KATNB1</i> promoter underlined and named as El...
(A) Unmethylated biotin-labeled WT oligonucleotide including +113/+122 Elk1 binding site on KATNA1 i...
<p><b>Panel (A)</b>: Shows the EMSA experiments to evaluate the specificity of the Oligo – Nuclear p...
<p><b>A.</b> 5′-end biotin-labeled double-stranded oligonucleotides probes including −462 G (lane 1–...
<p>(A) Schematic overview of the MIA/CD-RAP-dependent region between −7079 and −7038 bp, highlighted...
<p><b>Panel (A)</b>: Shows the EMSA experiments carried out to assess the displacement of the probe ...
<p>The respective MST binding curves are plotted on the left, the fluorescence channel depicting the...
<p>(<b>A</b>) Overview of oligonucleotides used for EMSA. LKB1 DSE: downstream element, position +35...
<p>CK, blank control; S1-3, sample 1–3; g. -963A, g. -963C showed that EMSA with wt and mutant oligo...
<p>All samples contained binding buffer (1.5 µL), Poly dI:dC (1.5 µL), G allele or A allele probe (0...
<p>A. EMSA analysis of TFAM binding to double-stranded oligonucleotide probes containing the C295T m...
<p>The gene names are indicated at the bottom of each panel. They are <i>PRP1</i> (A), <i>RHS19</i> ...
<p>Double stranded oligonucleotides with Mef2 consensus sequences were designed to test SmMef2 bindi...
<p>Upper panel represents schematic illustration of putative GLI binding sites. Positions relative t...