Table S1. Details of RNA-Seq reads from various tissues used for the SuSy expression study. Table S2. Raw counts for SuSy gene expression from different tissue sample. Table S3. SuSy transcripts from the SUGIT transcriptome database. Table S4. Codon-based Test of Positive Selection for analysis between SUSY1 sequences. Table S5. Codon-based Test of Positive Selection for analysis between SUSY2 sequences. Table S6. Codon-based Test of Positive Selection for analysis between SUSY4 sequences. Table S7. Log2-fold change values and FDR corrected heat map for SuSy transcripts expression in the genotype KQ228. S8. Log2-fold change values and FDR corrected heat map for SuSy transcripts expression in the genotype Q208. Table S9. Similarity percentag...
Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...
Sugarcane accumulates very high levels of sucrose in the culm. Elucidation of the molecular mechanis...
This Additional File is an Excel File containing 6 spreadsheets (Additional Tables 4–9) with the res...
Figure S1. Identification and sequence retrieval of SuSy transcripts from the SUGIT transcriptome re...
List of DEGs in the SUGIT, HST VS HSB. Table S8 List of DEGs in the SUGIT, LST VS LSB. Table S9 List...
Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...
Blast2GO and KEGG Mapping for DEGs in the SOGI-DGE with respect to starch and sucrose metabolism. Fi...
Bowtie2 alignment results of 3,103,708 million GBS tags in absolute and relative (in parentheses) va...
Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...
Dataset of BLUE values obtained for each genotype from model adjusted as described in Methods Sectio...
It is comprised by 13 Additional figures and methodologies that complement the data presented in the...
Supplementary RNA-Seq data file, including Table S1, Table S2, Table S3, Figure S2 and Figure S3 Tab...
List of sugarcane genes and primers used for qRT-PCR. Table S20. qRT-PCR Primers. (XLSX 9 kb
Figure S3. Relative gene expression levels for each isoform of sucrose synthesis pathways in diverse...
Input data (read count per gene per condition) and R code, to reproduce the differential gene expres...
Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...
Sugarcane accumulates very high levels of sucrose in the culm. Elucidation of the molecular mechanis...
This Additional File is an Excel File containing 6 spreadsheets (Additional Tables 4–9) with the res...
Figure S1. Identification and sequence retrieval of SuSy transcripts from the SUGIT transcriptome re...
List of DEGs in the SUGIT, HST VS HSB. Table S8 List of DEGs in the SUGIT, LST VS LSB. Table S9 List...
Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...
Blast2GO and KEGG Mapping for DEGs in the SOGI-DGE with respect to starch and sucrose metabolism. Fi...
Bowtie2 alignment results of 3,103,708 million GBS tags in absolute and relative (in parentheses) va...
Table with the list of orthologous genes between the five species: Sorghum bicolor (Abbreviation: SB...
Dataset of BLUE values obtained for each genotype from model adjusted as described in Methods Sectio...
It is comprised by 13 Additional figures and methodologies that complement the data presented in the...
Supplementary RNA-Seq data file, including Table S1, Table S2, Table S3, Figure S2 and Figure S3 Tab...
List of sugarcane genes and primers used for qRT-PCR. Table S20. qRT-PCR Primers. (XLSX 9 kb
Figure S3. Relative gene expression levels for each isoform of sucrose synthesis pathways in diverse...
Input data (read count per gene per condition) and R code, to reproduce the differential gene expres...
Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...
Sugarcane accumulates very high levels of sucrose in the culm. Elucidation of the molecular mechanis...
This Additional File is an Excel File containing 6 spreadsheets (Additional Tables 4–9) with the res...