A scatterplot of Gene Significance (GS) for cell numbers in the endosperm vs Module Membership (MM) in the turquoise modules in LT (19°C, left panel) and HT (27°C, right panel) networks.

Gene overlap between SCZ risk GS5-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-SCZ preserved modules on y axis; background modules calculated by consensus between GS5-SCZ pres...

Gene overlap between SCZ risk GS3-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-SCZ preserved modules on y axis; background modules calculated by consensus between GS3-SCZ pres...

Hierarchical clustering of highly significant genes expressed in CD34+ cells of MPNs.

Vladan P. Čokić (783601)
Pascal Mossuz (783602)
Jing Han (43038)
Nuria Socoro (783603)
Bojana B. Beleslin-Čokić (783604)
Olivera Mitrović (783605)
Tijana Subotički (783606)
Miloš Diklić (783607)
Danijela Leković (783608)
Mirjana Gotić (783609)
Raj K. Puri (169540)
Constance Tom Noguchi (783610)
Alan N. Schechter (99551)

August 2015

Statistical significance (p<0.01) was determined among JAK2V617F positive ET (yellow), PV ...

Correlation of Module Membership (MM) with Gene Significance (GS) in the four most relevant modules for PD.

Guanghao Xin (17583227)
Jingyan Niu (17583230)
Qinghua Tian (614031)
Yanchi Fu (17583233)
Lixia Chen (614030)
Tingting Yi (238503)
Kuo Tian (13148082)
Xuesong Sun (424554)
Na Wang (193263)
Jianjian Wang (288375)
Huixue Zhang (614029)
Lihua Wang (14548)

December 2023

(A) Scatterplot of brown modules. (B) Scatterplot of red modules. (C) Scatterplot of purple modules....

Correlation of module memberships versus gene significance for disease status.

Rasoul Godini (5607959)
Hossein Fallahi (54104)
Esmaeil Ebrahimie (112083)

August 2018

Scatterplot graphs show the correlation of module memberships of the genes in each module versus ...

Genes of module dark-turquoise that ranked top for intramodular connectivity according to module membership (MM) and soft connectivity (K) with trans or cis eQTL at p<10–5.

Siriluck Ponsuksili (82192)
Puntita Siengdee (723345)
Yang Du (506908)
Nares Trakooljul (723346)
Eduard Murani (82194)
Manfred Schwerin (82198)
Klaus Wimmers (82199)

April 2015

Genes of module dark-turquoise that ranked top for intramodular connectivity according to module ...

Relating the Gene Significance Measure for Weight (GSweight) to Genetic and Network Based Variables of the Blue Module

Anatole Ghazalpour (64680)
Sudheer Doss (64681)
Bin Zhang (64682)
Susanna Wang (46750)
Christopher Plaisier (64683)
Ruth Castellanos (64684)
Alec Brozell (64685)
Eric E Schadt (2549)
Thomas A Drake (61477)
Aldons J Lusis (45261)
Steve Horvath (28847)

February 2013

<div>(A) Scatterplot between GSweight (y-axis) and intramodular connectivity (kme</su...

Correlation of Connectivity on the x-axis with gene significance on the y-axis and identification of hub genes based on high MM.

Yun Zhou (308977)
Jiucheng Xu (553986)
Yunqing Liu (553987)
Juntao Li (33229)
Cuifang Chang (553988)
Cunshuan Xu (553989)

April 2014

The color represents the module and the dot represents the gene in the module. Red square represe...

Network modules identified in GBM.

Ethan Cerami (38316)
Emek Demir (367085)
Nikolaus Schultz (169137)
Barry S. Taylor (228490)
Chris Sander (1345)

February 2013

(A) Modules are densely connected sets of altered genes that may reflect oncogenic process...

Gene overlap between height GS5-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-Ht preserved modules on y axis; background modules calculated by consensus between GS5-Ht preser...

Gene overlap between height GS3-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-Ht preserved modules on y axis; background modules calculated by consensus between GS3-Ht preser...

Gene co-expression modules and meta-modules.

Austin T. Hilliard (120646)
Julie E. Miller (120649)
Steve Horvath (28847)
Stephanie A. White (120654)

November 2012

(A) Dendrogram shows the results of hierarchically clustering genes in the VSP. “Leaves” a...

Network plots of top hub genes in CAG length-dependent modules and their putative regulator microRNAs.

Peter Langfelder (76613)
Fuying Gao (406535)
Nan Wang (21935)
David Howland (108842)
Seung Kwak (720428)
Thomas F. Vogt (4759851)
Jeffrey S. Aaronson (4759854)
Jim Rosinski (611016)
Giovanni Coppola (46572)
Steve Horvath (28847)
X. William Yang (4759857)

January 2018

Each panel shows the top hub genes in one of the CAG length-dependent modules and microRNAs that ...

Weighted gene correlation network analysis (WGCNA) identifies lncRNAs-mRNA co-expression network modules.

Shaoyun Cheng (8717712)
Yanmin You (11944854)
Xiaoling Wang (6503)
Cun Yi (11944857)
Wei Zhang (405)
Yuxiang Xie (3565076)
Lei Xiu (498114)
Fang Luo (277928)
Yan Lu (32611)
Jipeng Wang (419413)
Wei Hu (6560)

January 2024

(A) The dendrogram shows 19 lncRNAs-mRNA co-expression modules identified using WGCNA. (B) The heatm...

Modular organization of a PBMC gene sub-network.

Leni Moldovan (139608)
Mirela Anghelina (555064)
Taylor Kantor (555065)
Desiree Jones (555066)
Enass Ramadan (555067)
Yang Xiang (35912)
Kun Huang (136241)
Arunark Kolipaka (555068)
William Malarkey (555069)
Nima Ghasemzadeh (555070)
Peter J. Mohler (35301)
Arshed Quyyumi (555071)
Nicanor I. Moldovan (93134)

April 2014

A. Network representation of the genetic covariation. The thickness of each connecting lin...

Gene overlap between SCZ risk GS5-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-SCZ preserved modules on y axis; background modules calculated by consensus between GS5-SCZ pres...

Gene overlap between SCZ risk GS3-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-SCZ preserved modules on y axis; background modules calculated by consensus between GS3-SCZ pres...

Hierarchical clustering of highly significant genes expressed in CD34+ cells of MPNs.

Vladan P. Čokić (783601)
Pascal Mossuz (783602)
Jing Han (43038)
Nuria Socoro (783603)
Bojana B. Beleslin-Čokić (783604)
Olivera Mitrović (783605)
Tijana Subotički (783606)
Miloš Diklić (783607)
Danijela Leković (783608)
Mirjana Gotić (783609)
Raj K. Puri (169540)
Constance Tom Noguchi (783610)
Alan N. Schechter (99551)

August 2015

Statistical significance (p<0.01) was determined among JAK2V617F positive ET (yellow), PV ...

Correlation of Module Membership (MM) with Gene Significance (GS) in the four most relevant modules for PD.

Guanghao Xin (17583227)
Jingyan Niu (17583230)
Qinghua Tian (614031)
Yanchi Fu (17583233)
Lixia Chen (614030)
Tingting Yi (238503)
Kuo Tian (13148082)
Xuesong Sun (424554)
Na Wang (193263)
Jianjian Wang (288375)
Huixue Zhang (614029)
Lihua Wang (14548)

December 2023

(A) Scatterplot of brown modules. (B) Scatterplot of red modules. (C) Scatterplot of purple modules....

Correlation of module memberships versus gene significance for disease status.

Rasoul Godini (5607959)
Hossein Fallahi (54104)
Esmaeil Ebrahimie (112083)

August 2018

Scatterplot graphs show the correlation of module memberships of the genes in each module versus ...

Genes of module dark-turquoise that ranked top for intramodular connectivity according to module membership (MM) and soft connectivity (K) with trans or cis eQTL at p<10–5.

Siriluck Ponsuksili (82192)
Puntita Siengdee (723345)
Yang Du (506908)
Nares Trakooljul (723346)
Eduard Murani (82194)
Manfred Schwerin (82198)
Klaus Wimmers (82199)

April 2015

Genes of module dark-turquoise that ranked top for intramodular connectivity according to module ...

Relating the Gene Significance Measure for Weight (GSweight) to Genetic and Network Based Variables of the Blue Module

Anatole Ghazalpour (64680)
Sudheer Doss (64681)
Bin Zhang (64682)
Susanna Wang (46750)
Christopher Plaisier (64683)
Ruth Castellanos (64684)
Alec Brozell (64685)
Eric E Schadt (2549)
Thomas A Drake (61477)
Aldons J Lusis (45261)
Steve Horvath (28847)

February 2013

<div>(A) Scatterplot between GSweight (y-axis) and intramodular connectivity (kme</su...

Correlation of Connectivity on the x-axis with gene significance on the y-axis and identification of hub genes based on high MM.

Yun Zhou (308977)
Jiucheng Xu (553986)
Yunqing Liu (553987)
Juntao Li (33229)
Cuifang Chang (553988)
Cunshuan Xu (553989)

April 2014

The color represents the module and the dot represents the gene in the module. Red square represe...

Network modules identified in GBM.

Ethan Cerami (38316)
Emek Demir (367085)
Nikolaus Schultz (169137)
Barry S. Taylor (228490)
Chris Sander (1345)

February 2013

(A) Modules are densely connected sets of altered genes that may reflect oncogenic process...

Gene overlap between height GS5-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-Ht preserved modules on y axis; background modules calculated by consensus between GS5-Ht preser...

Gene overlap between height GS3-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-Ht preserved modules on y axis; background modules calculated by consensus between GS3-Ht preser...

Gene co-expression modules and meta-modules.

Austin T. Hilliard (120646)
Julie E. Miller (120649)
Steve Horvath (28847)
Stephanie A. White (120654)

November 2012

(A) Dendrogram shows the results of hierarchically clustering genes in the VSP. “Leaves” a...

Network plots of top hub genes in CAG length-dependent modules and their putative regulator microRNAs.

Peter Langfelder (76613)
Fuying Gao (406535)
Nan Wang (21935)
David Howland (108842)
Seung Kwak (720428)
Thomas F. Vogt (4759851)
Jeffrey S. Aaronson (4759854)
Jim Rosinski (611016)
Giovanni Coppola (46572)
Steve Horvath (28847)
X. William Yang (4759857)

January 2018

Each panel shows the top hub genes in one of the CAG length-dependent modules and microRNAs that ...

Weighted gene correlation network analysis (WGCNA) identifies lncRNAs-mRNA co-expression network modules.

Shaoyun Cheng (8717712)
Yanmin You (11944854)
Xiaoling Wang (6503)
Cun Yi (11944857)
Wei Zhang (405)
Yuxiang Xie (3565076)
Lei Xiu (498114)
Fang Luo (277928)
Yan Lu (32611)
Jipeng Wang (419413)
Wei Hu (6560)

January 2024

(A) The dendrogram shows 19 lncRNAs-mRNA co-expression modules identified using WGCNA. (B) The heatm...

Modular organization of a PBMC gene sub-network.

Leni Moldovan (139608)
Mirela Anghelina (555064)
Taylor Kantor (555065)
Desiree Jones (555066)
Enass Ramadan (555067)
Yang Xiang (35912)
Kun Huang (136241)
Arunark Kolipaka (555068)
William Malarkey (555069)
Nima Ghasemzadeh (555070)
Peter J. Mohler (35301)
Arshed Quyyumi (555071)
Nicanor I. Moldovan (93134)

April 2014

A. Network representation of the genetic covariation. The thickness of each connecting lin...

Gene overlap between SCZ risk GS5-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-SCZ preserved modules on y axis; background modules calculated by consensus between GS5-SCZ pres...

Gene overlap between SCZ risk GS3-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-SCZ preserved modules on y axis; background modules calculated by consensus between GS3-SCZ pres...

Hierarchical clustering of highly significant genes expressed in CD34+ cells of MPNs.

Vladan P. Čokić (783601)
Pascal Mossuz (783602)
Jing Han (43038)
Nuria Socoro (783603)
Bojana B. Beleslin-Čokić (783604)
Olivera Mitrović (783605)
Tijana Subotički (783606)
Miloš Diklić (783607)
Danijela Leković (783608)
Mirjana Gotić (783609)
Raj K. Puri (169540)
Constance Tom Noguchi (783610)
Alan N. Schechter (99551)

August 2015

Statistical significance (p<0.01) was determined among JAK2V617F positive ET (yellow), PV ...

A scatterplot of Gene Significance (GS) for cell numbers in the endosperm vs Module Membership (MM) in the turquoise modules in LT (19°C, left panel) and HT (27°C, right panel) networks.

Abstract

Extracted data

A scatterplot of Gene Significance (GS) for cell numbers in the endosperm vs Module Membership (MM) in the turquoise modules in LT (19°C, left panel) and HT (27°C, right panel) networks.

Abstract

Extracted data

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