Gene overlap between height GS5-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

Publication date

October 2023

DOI

10.1371/journal.pgen.1010989.s016

Abstract

GS5-Ht preserved modules on y axis; background modules calculated by consensus between GS5-Ht preserved and GS5 removed networks on x axis. Numbers after modules color annotations = module size (total number of genes in the module). The color bar shows the significance of overlap (more intense red- more significant overlap). (TIF)</p

Extracted data

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Gene overlap between height GS5-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

Open link

Publication date

October 2023

DOI

10.1371/journal.pgen.1010989.s016

Abstract

Extracted data

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Similar functional divergence in biological processes enrichment like GS-SCZ preserved modules: tran...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 SCZ risk) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Gene overlap between height GS3-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-Ht preserved modules on y axis; background modules calculated by consensus between GS3-Ht preser...

Gene overlap between SCZ risk GS5-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-SCZ preserved modules on y axis; background modules calculated by consensus between GS5-SCZ pres...

Gene overlap between SCZ risk GS3-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-SCZ preserved modules on y axis; background modules calculated by consensus between GS3-SCZ pres...

Gene overlap of modules that concentrate genetic risk of SCZ risk in all co-expression networks of preserved GS3-SCZ-GS5-SCZ and GS3-GS5 height.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Gene overlap of modules that concentrate genetic risk of SCZ risk in all co-expression networks of p...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 height) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 height) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Gene overlap of modules that concentrate genetic risk of SCZ risk in co-expression networks of preserved GS3-SCZ-GS5-SCZ and GS3-GS5 height from LIBD dataset and the independent replication sample (PITT sample).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Gene overlap of modules that concentrate genetic risk of SCZ risk in co-expression networks of prese...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 height) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 height) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 SCZ risk) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

For visualization purposes, kME histograms from modules with size less than 200 genes are plotted se...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 SCZ risk) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 SCZ risk) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Functional profiling of GS height preserved modules with cumulative evidence for genomic risk effect on co-expression.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Similar functional divergence in biological processes enrichment like GS-SCZ preserved modules: tran...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 SCZ risk) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Gene overlap between height GS3-Ht preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-Ht preserved modules on y axis; background modules calculated by consensus between GS3-Ht preser...

Gene overlap between SCZ risk GS5-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS5-SCZ preserved modules on y axis; background modules calculated by consensus between GS5-SCZ pres...

Gene overlap between SCZ risk GS3-SCZ preserved modules and background modules.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

GS3-SCZ preserved modules on y axis; background modules calculated by consensus between GS3-SCZ pres...

Gene overlap of modules that concentrate genetic risk of SCZ risk in all co-expression networks of preserved GS3-SCZ-GS5-SCZ and GS3-GS5 height.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Gene overlap of modules that concentrate genetic risk of SCZ risk in all co-expression networks of p...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 height) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 height) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Gene overlap of modules that concentrate genetic risk of SCZ risk in co-expression networks of prese...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 height) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 height) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 SCZ risk) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

For visualization purposes, kME histograms from modules with size less than 200 genes are plotted se...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 SCZ risk) co-expression network (modules with less than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS5 SCZ risk) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Functional profiling of GS height preserved modules with cumulative evidence for genomic risk effect on co-expression.

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Similar functional divergence in biological processes enrichment like GS-SCZ preserved modules: tran...

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects (GS3 SCZ risk) co-expression network (modules with more than 200 genes).

Eugenia Radulescu (319733)
Qiang Chen (114038)
Giulio Pergola (349304)
Pasquale Di Carlo (4739136)
Shizhong Han (237203)
Joo Heon Shin (7432022)
Thomas M. Hyde (7534694)
Joel E. Kleinman (7534697)
Daniel R. Weinberger (9283256)

October 2023

Overlaid histograms of gene module membership (kME) of preserved vs. removed genomic scores effects ...

Gene overlap between height GS5-Ht <i>preserved</i> modules and background modules.

Abstract

Extracted data

Gene overlap between height GS5-Ht <i>preserved</i> modules and background modules.

Abstract

Extracted data

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