Table S2. Summary of lncRNAs identified in the chicken liver libraries. 1. Class code: “x” represent the antisense lncRNAs, “o” represent the sense lncRNAs, “j” represent the intronic lncRNAs, “i” represent the intron lncRNAs, and “u” represent the intergenic lncRNAs; 2. Known/Novel: We used reference genome download on Ensembl (galgal 5). However, there weas few annotated lncRNA in gga5 gtf files. As a result, all novel assembled transcripts (> 200 bp) by cufflinks with non protein-coding potential were labelled as novel lncRNAs. (XLSX 290 kb
Long non-coding RNAs (lncRNAs) appear as key regulators of gene expression through numerous mechanis...
Exon Locations of Chicken LncRNAs. The genomic locations of the exons of all chicken lncRNAs. (GTF 7...
Tissue-specific Indices of Chicken LncRNAs. The calculated tissue-specific indices (TSI) for each ln...
Table S5. Summary of differentially expressed lncRNAs between mature livers and immature livers in c...
Table S3. Sequence information of all expressed lncRNAs found in the present study. (FA 69436Â kb
Table S1. Summary of protein-coding genes identified in the chicken liver libraries. (XLSX 4278Â kb
Table S9. LncRNAs and its potential target genes that are involved in some key pathways related to t...
Table S7. The differentially expressed target protein-coding genes of the differentially expressed l...
Table S8. GO enrichment analysis (Pâ<â0.05) of differentially expressed protein-coding genes tar...
Table S4. Summary of differentially expressed protein-coding genes between mature livers and immatur...
Table S6. GO enrichment analysis (Pâ<â0.05) of the differentially expressed mRNAs. S gene number...
Expression of Chicken LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries pe...
LincRNAs’ comparisons to other databases and fundamental features. A: Overlaps between each two of o...
Sequences of Chicken LncRNAs. A fasta file containing all the lncRNA sequences from chickens. (FA 34...
International audienceLong non-coding RNAs (lncRNAs) appear as key regulators of gene expression thr...
Long non-coding RNAs (lncRNAs) appear as key regulators of gene expression through numerous mechanis...
Exon Locations of Chicken LncRNAs. The genomic locations of the exons of all chicken lncRNAs. (GTF 7...
Tissue-specific Indices of Chicken LncRNAs. The calculated tissue-specific indices (TSI) for each ln...
Table S5. Summary of differentially expressed lncRNAs between mature livers and immature livers in c...
Table S3. Sequence information of all expressed lncRNAs found in the present study. (FA 69436Â kb
Table S1. Summary of protein-coding genes identified in the chicken liver libraries. (XLSX 4278Â kb
Table S9. LncRNAs and its potential target genes that are involved in some key pathways related to t...
Table S7. The differentially expressed target protein-coding genes of the differentially expressed l...
Table S8. GO enrichment analysis (Pâ<â0.05) of differentially expressed protein-coding genes tar...
Table S4. Summary of differentially expressed protein-coding genes between mature livers and immatur...
Table S6. GO enrichment analysis (Pâ<â0.05) of the differentially expressed mRNAs. S gene number...
Expression of Chicken LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries pe...
LincRNAs’ comparisons to other databases and fundamental features. A: Overlaps between each two of o...
Sequences of Chicken LncRNAs. A fasta file containing all the lncRNA sequences from chickens. (FA 34...
International audienceLong non-coding RNAs (lncRNAs) appear as key regulators of gene expression thr...
Long non-coding RNAs (lncRNAs) appear as key regulators of gene expression through numerous mechanis...
Exon Locations of Chicken LncRNAs. The genomic locations of the exons of all chicken lncRNAs. (GTF 7...
Tissue-specific Indices of Chicken LncRNAs. The calculated tissue-specific indices (TSI) for each ln...