<p>Each numbered row corresponds to a particular model (hypothesis). The second column shows the parameters that are regulated by the signal <i>σ</i>. The fitted parameters shown in the third column are the parameters varied to minimize the mean error <i>χ</i><sup>2</sup>, <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1006305#pcbi.1006305.e019" target="_blank">Eq (5)</a>, whose values are given in the last column. The <i>K</i><sub><i>p</i>/<i>D</i></sub> parameter is present when a different dissociation constant is used for nanodiscs from that used for the vesicles. The <i>k</i><sub>off/0</sub> is the residue activity level of the “inactive” state. The fourth column shows the fixed large rate constants for the ...
<p>The time dependence of the apparent phosphoryl transfer rate constants for the two different dual...
1<p>Unit conversions are based on a cell cytoplasmic volume of L <a href="http://www.ploscompbiol.o...
<p>Dissociation constants for binding to vesicular sites that yield the plots depicted in <a href="h...
<p>The model parameters used in the simulation of the checkpoint pathway in <a href="http://www.plos...
<p>The rate constant is set equal to <i>k</i><sub>3</sub> throughout the work, whereas , and may d...
<p>(a) Decomposed fitting errors, , are shown for all 10 experiments. Different color lines (symbols...
<p><sup>a</sup> All rates for internal reactions were assumed to be the same as on the cell surface....
?<p>Fit to internalization and β-arrestin 2 binding data with CXCL12 and CXCR4 in CXCR4<sup>+</sup> ...
[a]<p>average concentration found in human blood.</p>[b]<p>protein radius calculated as if each prot...
<p>Default values of parameters are listed using model-specific units (left column) as appear in the...
<p>The asterisk represents the product between binding rates and concentration of GDI (subscripts th...
<p>A schematic showing the different states of the system and the reaction pathways between them. <i...
(a)<p>This table only lists values for parameters that characterize DNP-BSA interaction with IgE-Fcε...
<p>For each regulator, data is presented in a pair: the first bar represents exponential growth phas...
<p>Units for the rate constants of monomolecular reactions of electron transition inside the complex...
<p>The time dependence of the apparent phosphoryl transfer rate constants for the two different dual...
1<p>Unit conversions are based on a cell cytoplasmic volume of L <a href="http://www.ploscompbiol.o...
<p>Dissociation constants for binding to vesicular sites that yield the plots depicted in <a href="h...
<p>The model parameters used in the simulation of the checkpoint pathway in <a href="http://www.plos...
<p>The rate constant is set equal to <i>k</i><sub>3</sub> throughout the work, whereas , and may d...
<p>(a) Decomposed fitting errors, , are shown for all 10 experiments. Different color lines (symbols...
<p><sup>a</sup> All rates for internal reactions were assumed to be the same as on the cell surface....
?<p>Fit to internalization and β-arrestin 2 binding data with CXCL12 and CXCR4 in CXCR4<sup>+</sup> ...
[a]<p>average concentration found in human blood.</p>[b]<p>protein radius calculated as if each prot...
<p>Default values of parameters are listed using model-specific units (left column) as appear in the...
<p>The asterisk represents the product between binding rates and concentration of GDI (subscripts th...
<p>A schematic showing the different states of the system and the reaction pathways between them. <i...
(a)<p>This table only lists values for parameters that characterize DNP-BSA interaction with IgE-Fcε...
<p>For each regulator, data is presented in a pair: the first bar represents exponential growth phas...
<p>Units for the rate constants of monomolecular reactions of electron transition inside the complex...
<p>The time dependence of the apparent phosphoryl transfer rate constants for the two different dual...
1<p>Unit conversions are based on a cell cytoplasmic volume of L <a href="http://www.ploscompbiol.o...
<p>Dissociation constants for binding to vesicular sites that yield the plots depicted in <a href="h...