Additional file 2: Fig. S1 . ATAC-seq data show strong correlation between replicates and with Dnase I hypersensitivity data. Scatterplots display normalized read counts (CPM) within ATAC-seq determined regulatory sites, and values represent pairwise Pearson correlation coefficien
Abstract Background Recent technological advances have delivered the genome-wide targets of many imp...
textabstractApproximately 98% of mammalian DNA is noncoding, yet we understand relatively little abo...
<p><b>A, C.</b> Number of TSS with different CRX (<b>A</b>) and NRL (<b>C</b>) binding for rod-speci...
Additional file 1 . Analysis and quantification of ATAC-seq and ChIP-seq data. Excel sheets report; ...
Additional file 3: Fig. S2 . Affected regulatory sites show distinct changes in activity over normal...
Additional file 9: Fig. S7 . CRX is required to activate Dependent Group C enhancer elements and rem...
Additional file 6: Fig. S4 . Distinct group-related genes show different expression values. Boxplots...
Additional file 12. De novo motif analysis identifies sequences enriched in different sets of CRX-bo...
Additional file 8: Fig. S6 . Dependent and Independent sites show different chromatin state dynamics...
Additional file 13: Fig. S10 . TF motifs explain nature of Independent site activation in absence of...
Additional file 2: Fig. S1. Quality controls of ATAC-seq data. a. Distributions of insert sizes from...
Additional file 6: Fig. S3. Analysis of unique or shared clusters of open chromatin regions and thei...
Additional file 7: Fig. S4. Correlation of DARs and DEGs. a. Pie charts show the percentages of diff...
Additional file 9: Fig. S6. ATAC-seq peaks at previously described Prox1 binding regions at Lctl, Fg...
Crx is the principal transcription factor of the photoreceptor transcriptional network and is a key ...
Abstract Background Recent technological advances have delivered the genome-wide targets of many imp...
textabstractApproximately 98% of mammalian DNA is noncoding, yet we understand relatively little abo...
<p><b>A, C.</b> Number of TSS with different CRX (<b>A</b>) and NRL (<b>C</b>) binding for rod-speci...
Additional file 1 . Analysis and quantification of ATAC-seq and ChIP-seq data. Excel sheets report; ...
Additional file 3: Fig. S2 . Affected regulatory sites show distinct changes in activity over normal...
Additional file 9: Fig. S7 . CRX is required to activate Dependent Group C enhancer elements and rem...
Additional file 6: Fig. S4 . Distinct group-related genes show different expression values. Boxplots...
Additional file 12. De novo motif analysis identifies sequences enriched in different sets of CRX-bo...
Additional file 8: Fig. S6 . Dependent and Independent sites show different chromatin state dynamics...
Additional file 13: Fig. S10 . TF motifs explain nature of Independent site activation in absence of...
Additional file 2: Fig. S1. Quality controls of ATAC-seq data. a. Distributions of insert sizes from...
Additional file 6: Fig. S3. Analysis of unique or shared clusters of open chromatin regions and thei...
Additional file 7: Fig. S4. Correlation of DARs and DEGs. a. Pie charts show the percentages of diff...
Additional file 9: Fig. S6. ATAC-seq peaks at previously described Prox1 binding regions at Lctl, Fg...
Crx is the principal transcription factor of the photoreceptor transcriptional network and is a key ...
Abstract Background Recent technological advances have delivered the genome-wide targets of many imp...
textabstractApproximately 98% of mammalian DNA is noncoding, yet we understand relatively little abo...
<p><b>A, C.</b> Number of TSS with different CRX (<b>A</b>) and NRL (<b>C</b>) binding for rod-speci...