<p>A. Schematic of the transgene showing the four regions analyzed for histone modifications, along with their base-pair position relative to the 5′ end of the transgene. We determined enrichment of H3K4me2 (B), H3K9me3 (C), H3K9me2 (D), and H3K27me3 (E) in four Tg5S lines (black circles) and two control Tg0 lines (white circles). Each heatmap illustrates the relative enrichment of that modification at each position in each line. For comparison, heatmaps of <i>Tk</i> mRNA levels, nucleolar localization, TFIIIC65 enrichment, and copy number for each line are shown in (F). ND, not determined.</p
Table S4. Analysis of histone marks in repressed regions. For each tissue, the numbers of repressed ...
<p>The figure shows the levels H3K9me2 and H3K9ac observed at the gene body regions of <i>WRKY22</i>...
<p>Genes with quantified methylation status around their TSS (based on Illumina annotation) and vali...
<p>The figure shows the levels of H3K9me2 and H3K9ac found at the gene body regions of <i>SUVH2</i>,...
<div><p>(A) H3K4Me3 boundaries occur across TSSs. The <i>x</i>-axis represents the level of H3K4Me3 ...
<p>Profiles of H3K27me3 patterns of the four sets genes were shown across the gene bodies. The class...
<p>The schematic shows the structure of the X centromere. Each number along the centromere represent...
<p>The schematics at the top show the structure of the normal <i>(A)</i> and partially deleted <i>(B...
<p>H2A.Z, H3K4me1, H3K4me2, H3K4me3, H3K9ac and H3K27ac were located mainly within the two nucleosom...
<p>(A) Commassie-stained gel of purified histones from the indicated strains (top) and western blots...
<p>Heatmap of ChIP-qPCR average fold enrichment for all TEs analyzed. Fold enrichment for each wild ...
<p>The enlarged map of H3K27me3 histone modification on KSHV genome at higher resolution is illustra...
<p>(A) Experimental overview of the genome-wide analysis of the histone modifications of mESC, iPSCs...
<p>(a) Heatmap showing the gene-level H3K4me1 scores for the 100 most significantly different genes....
<p>A) Heatmap of H3K36me3 near the transcription start sites (TSS) and transcription end sites (TES)...
Table S4. Analysis of histone marks in repressed regions. For each tissue, the numbers of repressed ...
<p>The figure shows the levels H3K9me2 and H3K9ac observed at the gene body regions of <i>WRKY22</i>...
<p>Genes with quantified methylation status around their TSS (based on Illumina annotation) and vali...
<p>The figure shows the levels of H3K9me2 and H3K9ac found at the gene body regions of <i>SUVH2</i>,...
<div><p>(A) H3K4Me3 boundaries occur across TSSs. The <i>x</i>-axis represents the level of H3K4Me3 ...
<p>Profiles of H3K27me3 patterns of the four sets genes were shown across the gene bodies. The class...
<p>The schematic shows the structure of the X centromere. Each number along the centromere represent...
<p>The schematics at the top show the structure of the normal <i>(A)</i> and partially deleted <i>(B...
<p>H2A.Z, H3K4me1, H3K4me2, H3K4me3, H3K9ac and H3K27ac were located mainly within the two nucleosom...
<p>(A) Commassie-stained gel of purified histones from the indicated strains (top) and western blots...
<p>Heatmap of ChIP-qPCR average fold enrichment for all TEs analyzed. Fold enrichment for each wild ...
<p>The enlarged map of H3K27me3 histone modification on KSHV genome at higher resolution is illustra...
<p>(A) Experimental overview of the genome-wide analysis of the histone modifications of mESC, iPSCs...
<p>(a) Heatmap showing the gene-level H3K4me1 scores for the 100 most significantly different genes....
<p>A) Heatmap of H3K36me3 near the transcription start sites (TSS) and transcription end sites (TES)...
Table S4. Analysis of histone marks in repressed regions. For each tissue, the numbers of repressed ...
<p>The figure shows the levels H3K9me2 and H3K9ac observed at the gene body regions of <i>WRKY22</i>...
<p>Genes with quantified methylation status around their TSS (based on Illumina annotation) and vali...