Examples of generated motifs.

<p>The figure shows examples of the motifs produced by each method and the corresponding JASPAR motif. For three proteins, the PWM logos produced by each method and the experimentally and independently established motif in the JASPAR database are shown. AM was trained on motif length 8, while for BE, RM and SW only the most informative contiguous positions were kept. We chose TFs whose motifs had information content most similar to the averages of the different methods.