<p>a) true motif given by the JASPAR database, b) predicted motif from SVM+POIM+motifPOIM (MRQ = 97.05), c) SVM+gPOIM+convex motifPOIM (MRQ = 99.54), and d) CNN+gPOIM+convex motifPOIM (MRQ = 99.56).</p
Linear motifs have an integral role in dynamic cell functions, including cell signaling. However, du...
Taher L. Computational methods for splice site prediction. Bielefeld (Germany): Bielefeld University...
BACKGROUND: Network motifs are connectivity structures that occur with significantly higher frequenc...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>The figure shows examples of the motifs produced by each method and the corresponding JASPAR moti...
<p>In a first step, a POIM is computed corresponding to the trained SVM (shown on the right, from to...
Background: Predicting and proper ranking of canonical splice sites (SSs) is a challenging problem i...
It is of significance for splice site prediction to develop novel algorithms that combine the sequen...
<p>*Provides pre-computed results for <i>S. cerevisiae and H. sapiens</i> but does not accept sequen...
<p>given a trained SVM, we construct the corresponding POIM before applying the proposed motifPOIM a...
<p><b>Copyright information:</b></p><p>Taken from "Features generated for computational splice-site ...
<p>(<b>A</b>) The deviation between the predicted and annotated DNA motifs (i.e., PFM transfer error...
Motivation: Finding common patterns, motifs, from a set of promoter regions of coregulated genes is ...
Linear motifs have an integral role in dynamic cell functions, including cell signaling. However, du...
Taher L. Computational methods for splice site prediction. Bielefeld (Germany): Bielefeld University...
BACKGROUND: Network motifs are connectivity structures that occur with significantly higher frequenc...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>Figure (a) shows the (normalized) ground truth motif given by the JASPAR database (20 nucleotides...
<p>The figure shows examples of the motifs produced by each method and the corresponding JASPAR moti...
<p>In a first step, a POIM is computed corresponding to the trained SVM (shown on the right, from to...
Background: Predicting and proper ranking of canonical splice sites (SSs) is a challenging problem i...
It is of significance for splice site prediction to develop novel algorithms that combine the sequen...
<p>*Provides pre-computed results for <i>S. cerevisiae and H. sapiens</i> but does not accept sequen...
<p>given a trained SVM, we construct the corresponding POIM before applying the proposed motifPOIM a...
<p><b>Copyright information:</b></p><p>Taken from "Features generated for computational splice-site ...
<p>(<b>A</b>) The deviation between the predicted and annotated DNA motifs (i.e., PFM transfer error...
Motivation: Finding common patterns, motifs, from a set of promoter regions of coregulated genes is ...
Linear motifs have an integral role in dynamic cell functions, including cell signaling. However, du...
Taher L. Computational methods for splice site prediction. Bielefeld (Germany): Bielefeld University...
BACKGROUND: Network motifs are connectivity structures that occur with significantly higher frequenc...
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