<p>Gray boxes between dendrogram and matrix names indicate motif clusters. The dotted line points out the 50% motif family threshold. Some clusters were merged below that threshold, because FBPs formed in the course of the clustering process provided for a better presentation of the motif family than the basic motifs.</p
One of the limiting factors in deciphering transcriptional regulatory networks is the effectiveness ...
<p>Sequence logos of found motifs in Mb and Ngb genes are shown. The found motifs are G-rich and hig...
Clustering dendrogram of genes, with dissimilarity based on topological overlap, together with assig...
<p>The figure shows examples of the motifs produced by each method and the corresponding JASPAR moti...
<p>This file contains clustered motifs from three sources:</p> <p>- JASPAR (Portales-Casamar et al. ...
The data for each discovered motif is a count matrix Ni which can have different widths and number o...
Journal articleBackground: Familial binding profiles (FBPs) represent the average binding specificit...
Complex networks are frequently characterized by metrics for which particular subgraphs are counted....
MotifCluster finds related motifs in a set of sequences, and clusters the sequences into families us...
<p>Gene name is given as <i>D. pseudoobscura</i> with <i>D. melanogaster</i> homolog in parentheses....
<p>A. Each graph shows the motif detection accuracy (y-axis) as a function of the number of sequence...
International audienceTranscription factor (TF) databases contain multitudes of binding motifs (TFBM...
<p>Dendogram showing the results of hierarchical cluster analysis on the amino acid signatures for t...
<p>Two four-node significant motifs at 24h, 7d -IR are assembled to form six-node significant motifs...
<div><p>Complex networks are frequently characterized by metrics for which particular subgraphs are ...
One of the limiting factors in deciphering transcriptional regulatory networks is the effectiveness ...
<p>Sequence logos of found motifs in Mb and Ngb genes are shown. The found motifs are G-rich and hig...
Clustering dendrogram of genes, with dissimilarity based on topological overlap, together with assig...
<p>The figure shows examples of the motifs produced by each method and the corresponding JASPAR moti...
<p>This file contains clustered motifs from three sources:</p> <p>- JASPAR (Portales-Casamar et al. ...
The data for each discovered motif is a count matrix Ni which can have different widths and number o...
Journal articleBackground: Familial binding profiles (FBPs) represent the average binding specificit...
Complex networks are frequently characterized by metrics for which particular subgraphs are counted....
MotifCluster finds related motifs in a set of sequences, and clusters the sequences into families us...
<p>Gene name is given as <i>D. pseudoobscura</i> with <i>D. melanogaster</i> homolog in parentheses....
<p>A. Each graph shows the motif detection accuracy (y-axis) as a function of the number of sequence...
International audienceTranscription factor (TF) databases contain multitudes of binding motifs (TFBM...
<p>Dendogram showing the results of hierarchical cluster analysis on the amino acid signatures for t...
<p>Two four-node significant motifs at 24h, 7d -IR are assembled to form six-node significant motifs...
<div><p>Complex networks are frequently characterized by metrics for which particular subgraphs are ...
One of the limiting factors in deciphering transcriptional regulatory networks is the effectiveness ...
<p>Sequence logos of found motifs in Mb and Ngb genes are shown. The found motifs are G-rich and hig...
Clustering dendrogram of genes, with dissimilarity based on topological overlap, together with assig...