<p>The interaction between transcription factors (inner circle) and both upregulated and downregulated proteins listed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0062039#pone-0062039-t001" target="_blank">Table 1</a> (outer circle) is shown. Upregulated and down-regulated expressions are indicated in red and green, respectively, the darker the red color the higher level of protein expression. Numbers indicate the protein IDs shown in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0062039#pone-0062039-t001" target="_blank">Table 1</a>. Arrows denote activation, and T-bars represent inhibition. Solid and dashed arrows represent direct and indirect interactions, respectively. All <i>P</i> va...
<p>The network is associated with immunological and inflammatory disease. Solid lines correspond to ...
†<p>The predicted activation state is inferred from the bias-corrected z-score.</p>††<p>The bias-cor...
<p>Genes shown were filtered for interactions reported in humans only and presented by cellular loca...
<p>Predicted activation or inhibition of activity for selected Transcriptional Regulators (TR) predi...
<p>The network is associated with cancer disease. Solid lines correspond to direct protein-to-protei...
<p>Red symbols represent upregulated and green denote downregulated proteins. Asterisks (*) denote m...
<p>Networks and predicted upstream regulators assigned by IPA of differentially expressed proteins i...
IPA displays the likely molecular effectors of the protein deregulation observed. TGF-β1 (A), SMAD3 ...
<p>The proteins significantly regulated (>20% regulation) due to fast decompression (Tables <a href=...
<p>The transcription regulation networks initiated through activation of SP1 (A), c-Myc (B), HNF4-al...
<p>(A) Diagram of the relationship between transcription factor regulation and rearing conditions. T...
<p>Encircled proteins are DPYSL2, RTN4, and NF-kB, which show a high centrality measure. Green nodes...
<p>Proteins with significant differential expression regulate a network of cell-to-cell signaling an...
grantor: University of TorontoProtein-protein interactions are important both for basal tr...
<p>The network was generated in IPA using triangle connectivity based on focus genes (30 from our di...
<p>The network is associated with immunological and inflammatory disease. Solid lines correspond to ...
†<p>The predicted activation state is inferred from the bias-corrected z-score.</p>††<p>The bias-cor...
<p>Genes shown were filtered for interactions reported in humans only and presented by cellular loca...
<p>Predicted activation or inhibition of activity for selected Transcriptional Regulators (TR) predi...
<p>The network is associated with cancer disease. Solid lines correspond to direct protein-to-protei...
<p>Red symbols represent upregulated and green denote downregulated proteins. Asterisks (*) denote m...
<p>Networks and predicted upstream regulators assigned by IPA of differentially expressed proteins i...
IPA displays the likely molecular effectors of the protein deregulation observed. TGF-β1 (A), SMAD3 ...
<p>The proteins significantly regulated (>20% regulation) due to fast decompression (Tables <a href=...
<p>The transcription regulation networks initiated through activation of SP1 (A), c-Myc (B), HNF4-al...
<p>(A) Diagram of the relationship between transcription factor regulation and rearing conditions. T...
<p>Encircled proteins are DPYSL2, RTN4, and NF-kB, which show a high centrality measure. Green nodes...
<p>Proteins with significant differential expression regulate a network of cell-to-cell signaling an...
grantor: University of TorontoProtein-protein interactions are important both for basal tr...
<p>The network was generated in IPA using triangle connectivity based on focus genes (30 from our di...
<p>The network is associated with immunological and inflammatory disease. Solid lines correspond to ...
†<p>The predicted activation state is inferred from the bias-corrected z-score.</p>††<p>The bias-cor...
<p>Genes shown were filtered for interactions reported in humans only and presented by cellular loca...