<p>(a) Gel electrophoresis of the products generated by incubation of hTop1 (lanes 1-8) and hTop1(pf-Linker) (lanes 9-16) with the [γ -<sup>32</sup>P] end-labelled duplex DNA (CL25/CP25), shown at the top of the figure. The arrow indicates the preferred cleavage site. The duplex was incubated for different time intervals with hTop1 in absence (lanes 1-4) and in presence of CPT (lanes 4-8) or with hTop1(pf-Linker) in absence (lanes 9-12) and in presence of CPT (lanes 13-16). Lane 17, no enzyme added. The band corresponding to the enzyme–substrate cleaved complex, has been indicated by an asterisk. (b) Percentages of the hTop1 (black) or hTop1(pf-Linker) (grey) cleavage complex generated after 1 minute of incubation normalized to the total am...
<p>In each, lane 1 contains free DNA, lane 2 no competitor and lanes 3–8 contain 0.25, 0.5, 0.75, 1,...
<p>A. Recognition site sequences. The intron-less sequence of the sense strand of the Pf-WMP3 <i>DNA...
<p>Purified PfuExo I (10 nM) was incubated with 5′- overhang and 3′-overhang DNAs (5 nM) for various...
<p>(a) Gel analysis of the religation kinetics observed when incubating the hTop1- or hTop1(pf-Linke...
<p>(a) Time course (0.5-60 minutes) of the cleavage reaction of the purified hTop1 (lanes 1-8), or h...
<p>(a) Sequence of the CL14-U/CP25 substrate and highlight of the Top1 cleavage site containing a sc...
<p>(<b>A</b>) Competition cleavage experiments with AvrBs3-28-L-PvuII<sup>T46G</sup> under physiolog...
<p><b>(a)</b> Diagrammatic representation of the DNA substrates used: pUC19 (left) and pTK-neo (righ...
<p>The sequences at the top of the figure schematically depict the 39-H/H (optimal substrate with tw...
<p>Panels A and B show the cleavage of two substrates, one containing Phe in the P1 position and one...
We show how polyacrylamide gel electrophoresis of radiolabeled DNA can be used to measure the hairpi...
<p>The 5´-end <sup>32</sup>P-labeled 123-bp DNA fragment (~1 nM) was pre-incubated with 1–15 nM (<i>...
<p>Bar graphs depict the fraction of either ligated DNA (product, blue) or abortive adenylylation (A...
The free energy for oligodeoxyribonucleotide-directed triple helix formation at a single site on a D...
<p>(A) Scheme of the 18-bp I-SceI recognition sequence showing the cleavage positions of wild-type I...
<p>In each, lane 1 contains free DNA, lane 2 no competitor and lanes 3–8 contain 0.25, 0.5, 0.75, 1,...
<p>A. Recognition site sequences. The intron-less sequence of the sense strand of the Pf-WMP3 <i>DNA...
<p>Purified PfuExo I (10 nM) was incubated with 5′- overhang and 3′-overhang DNAs (5 nM) for various...
<p>(a) Gel analysis of the religation kinetics observed when incubating the hTop1- or hTop1(pf-Linke...
<p>(a) Time course (0.5-60 minutes) of the cleavage reaction of the purified hTop1 (lanes 1-8), or h...
<p>(a) Sequence of the CL14-U/CP25 substrate and highlight of the Top1 cleavage site containing a sc...
<p>(<b>A</b>) Competition cleavage experiments with AvrBs3-28-L-PvuII<sup>T46G</sup> under physiolog...
<p><b>(a)</b> Diagrammatic representation of the DNA substrates used: pUC19 (left) and pTK-neo (righ...
<p>The sequences at the top of the figure schematically depict the 39-H/H (optimal substrate with tw...
<p>Panels A and B show the cleavage of two substrates, one containing Phe in the P1 position and one...
We show how polyacrylamide gel electrophoresis of radiolabeled DNA can be used to measure the hairpi...
<p>The 5´-end <sup>32</sup>P-labeled 123-bp DNA fragment (~1 nM) was pre-incubated with 1–15 nM (<i>...
<p>Bar graphs depict the fraction of either ligated DNA (product, blue) or abortive adenylylation (A...
The free energy for oligodeoxyribonucleotide-directed triple helix formation at a single site on a D...
<p>(A) Scheme of the 18-bp I-SceI recognition sequence showing the cleavage positions of wild-type I...
<p>In each, lane 1 contains free DNA, lane 2 no competitor and lanes 3–8 contain 0.25, 0.5, 0.75, 1,...
<p>A. Recognition site sequences. The intron-less sequence of the sense strand of the Pf-WMP3 <i>DNA...
<p>Purified PfuExo I (10 nM) was incubated with 5′- overhang and 3′-overhang DNAs (5 nM) for various...