Putative DMRs of H19.

Chromosomal localization of differential DNA methylation regions (DMR), differential expressed genes, and clusters of gene expression.

Carlos Guerrero-Bosagna (131795)
Marina Savenkova (395845)
Md. Muksitul Haque (395846)
Eric Nilsson (166681)
Michael K. Skinner (131798)

March 2013

The chromosomal number and relative size are presented. The DMR (arrow), gene expression changes ...

Chromosomal plot of somatic cell dataset SG shows the predicted 3+ sites and the clusters.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

Potential predicted DMR sites (1,503) when SG is used as the training set to predict on the rest ...

Generation of a genomic tiling array of the human Major Histocompatibility Complex (MHC) and its application for DNA methylation analysis-6

Eleni M Tomazou (77342)
Vardhman K Rakyan (5233)
Gregory Lefebvre (77343)
Robert Andrews (30281)
Peter Ellis (15708)
David K Jackson (77344)
Cordelia Langford (77345)
Matthew D Francis (77346)
Liselotte Bäckdahl (77347)
Marcos Miretti (77348)
Penny Coggill (16745)
Diego Ottaviani (77349)
Denise Sheer (77350)
Adele Murrell (77351)
Stephan Beck (5246)

December 2011

E browser. Each vertical black line represents a putative tDMR. The high density of 18 tDMRs within ...

Putative DMRs of IGF2R.

Li Meng (136180)
Yongjie Wan (478265)
Yanyan Sun (351971)
Yanli Zhang (309699)
Ziyu Wang (451367)
Yang Song (1235364)
Feng Wang (44414)

October 2013

Schematic of CpG site distributions in the putative DMRs of imprinted gene IGF2R; Vertical...

Regional plots of replicated DMRs.

Peter Henneman (174625)
Arjan Bouman (5043482)
Adri Mul (3493835)
Lia Knegt (5043479)
Anne-Marie van der Kevie-Kersemaekers (3501122)
Nitash Zwaveling-Soonawala (5043473)
Hanne E. J. Meijers-Heijboer (395215)
A. S. Paul van Trotsenburg (291417)
Marcel M. Mannens (5043476)

March 2018

CpGs within DMRs are annotated between colored vertical lines. (A) RUNX1, overlapping (4 o...

Schematic overview of the IGF2/H19 region, measured loci and genetic variation covered.

Elmar W. Tobi (161294)
P. Eline Slagboom (28184)
Jenny van Dongen (109719)
Dennis Kremer (161301)
Aryeh D. Stein (161306)
Hein Putter (73805)
Bastiaan T. Heijmans (149278)
L. H. Lumey (161311)

May 2012

The colored boxes in the loci pane represent the DNA methylation measurements as distributed over...

Frequency of DMRs’ distances to closest Transcription Start Site and DMRs location distribution regarding genes and CpG islands.

José A. Carrillo (757240)
Yanghua He (155475)
Juan Luo (149338)
Kimberly R. Menendez (545269)
Nathaniel L. Tablante (378239)
Keji Zhao (149346)
Joseph N. Paulson (760136)
Bichun Li (446931)
Jiuzhou Song (41834)

June 2015

a) The distance from the transcription start site is represented in base pairs from the 0 in the ...

Differential DNA methylated region (DMR) CPG density distribution.

Mohan Manikkam (131789)
Carlos Guerrero-Bosagna (131795)
Rebecca Tracey (131793)
Md. M. Haque (136011)
Michael K. Skinner (131798)

February 2012

The CpG density (CpG/100 bp) associated with all exposure DMR are presented with number of DMR on...

CpG density plot showing number of predicted DMR sites correlated with CpG density.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

(A) CpG density from the potential predicted germ cell DMR sites (3,234) when DHVPP is used as th...

Distribution of the differentially methylated regions.

Daniela L. Buscariollo (140729)
Xiefan Fang (514845)
Victoria Greenwood (514846)
Huiling Xue (274349)
Scott A. Rivkees (171942)
Christopher C. Wendler (171937)

January 2014

(A) A Venn diagram indicates the number of DMRs that are shared by different comparison groups. T...

Methylation profiles of 10,775 promoter region DM loci by DMRs and in relation to CpG islands.

Min-Ae Song (379924)
Maarit Tiirikainen (183149)
Sandi Kwee (379925)
Gordon Okimoto (379926)
Herbert Yu (379927)
Linda L. Wong (379928)

February 2013

A. Distribution of DM loci in CpG islands and the surrounding shore (0–2 kb from promoter ...

DNA methylation pattern of CpG dyads at repetitive elements in WT ESCs, MEFs, and embryonic liver.

Julia Arand (155279)
David Spieler (155282)
Tommy Karius (155285)
Miguel R. Branco (42502)
Daniela Meilinger (107843)
Alexander Meissner (11643)
Thomas Jenuwein (70681)
Guoliang Xu (67200)
Heinrich Leonhardt (18589)
Verena Wolf (155286)
Jörn Walter (37094)

June 2012

The bars sum up the DNA methylation status of all CpG dyads. The map next to the bar represents t...

Incidence of consensus motifs of known transcription factor binding sites in DMR from a variety of F3 generation exposure lineage sperm DNA.

Carlos Guerrero-Bosagna (131795)
Shelby Weeks (579158)
Michael K. Skinner (131798)

June 2014

Columns with (**) represent significant change with p<0.01, while columns with (*) represent sign...

Genomic chromosome locations of predicted DMR and overlap between germ cell and somatic cell predicted sites.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

(A) Germ cell DHVPP and somatic cell SG predicted number of (+3) sites in each chromosome. (B) Ge...

DMCs affect distinct genomic regions in IDH-mut and MLLr AMLs.

Altuna Akalin (28028)
Francine E. Garrett-Bakelman (156647)
Matthias Kormaksson (103832)
Jennifer Busuttil (156649)
Lu Zhang (50563)
Irina Khrebtukova (156652)
Thomas A. Milne (156654)
Yongsheng Huang (156655)
Debabrata Biswas (156656)
Jay L. Hess (156657)
C. David Allis (156658)
Robert G. Roeder (156660)
Peter J. M. Valk (156662)
Bob Löwenberg (5648797)
Ruud Delwel (65976)
Hugo F. Fernandez (156665)
Elisabeth Paietta (88750)
Martin S. Tallman (156670)
Gary P. Schroth (156674)
Christopher E. Mason (152583)
Ari Melnick (88754)
Maria E. Figueroa (88744)

June 2012

(A) Top: cartoon representation of the different genomic regions analyzed. Bottom: Pie charts ill...

Chromosomal localization of differential DNA methylation regions (DMR), differential expressed genes, and clusters of gene expression.

Carlos Guerrero-Bosagna (131795)
Marina Savenkova (395845)
Md. Muksitul Haque (395846)
Eric Nilsson (166681)
Michael K. Skinner (131798)

March 2013

The chromosomal number and relative size are presented. The DMR (arrow), gene expression changes ...

Chromosomal plot of somatic cell dataset SG shows the predicted 3+ sites and the clusters.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

Potential predicted DMR sites (1,503) when SG is used as the training set to predict on the rest ...

Generation of a genomic tiling array of the human Major Histocompatibility Complex (MHC) and its application for DNA methylation analysis-6

Eleni M Tomazou (77342)
Vardhman K Rakyan (5233)
Gregory Lefebvre (77343)
Robert Andrews (30281)
Peter Ellis (15708)
David K Jackson (77344)
Cordelia Langford (77345)
Matthew D Francis (77346)
Liselotte Bäckdahl (77347)
Marcos Miretti (77348)
Penny Coggill (16745)
Diego Ottaviani (77349)
Denise Sheer (77350)
Adele Murrell (77351)
Stephan Beck (5246)

December 2011

E browser. Each vertical black line represents a putative tDMR. The high density of 18 tDMRs within ...

Putative DMRs of IGF2R.

Li Meng (136180)
Yongjie Wan (478265)
Yanyan Sun (351971)
Yanli Zhang (309699)
Ziyu Wang (451367)
Yang Song (1235364)
Feng Wang (44414)

October 2013

Schematic of CpG site distributions in the putative DMRs of imprinted gene IGF2R; Vertical...

Regional plots of replicated DMRs.

Peter Henneman (174625)
Arjan Bouman (5043482)
Adri Mul (3493835)
Lia Knegt (5043479)
Anne-Marie van der Kevie-Kersemaekers (3501122)
Nitash Zwaveling-Soonawala (5043473)
Hanne E. J. Meijers-Heijboer (395215)
A. S. Paul van Trotsenburg (291417)
Marcel M. Mannens (5043476)

March 2018

CpGs within DMRs are annotated between colored vertical lines. (A) RUNX1, overlapping (4 o...

Schematic overview of the IGF2/H19 region, measured loci and genetic variation covered.

Elmar W. Tobi (161294)
P. Eline Slagboom (28184)
Jenny van Dongen (109719)
Dennis Kremer (161301)
Aryeh D. Stein (161306)
Hein Putter (73805)
Bastiaan T. Heijmans (149278)
L. H. Lumey (161311)

May 2012

The colored boxes in the loci pane represent the DNA methylation measurements as distributed over...

Frequency of DMRs’ distances to closest Transcription Start Site and DMRs location distribution regarding genes and CpG islands.

José A. Carrillo (757240)
Yanghua He (155475)
Juan Luo (149338)
Kimberly R. Menendez (545269)
Nathaniel L. Tablante (378239)
Keji Zhao (149346)
Joseph N. Paulson (760136)
Bichun Li (446931)
Jiuzhou Song (41834)

June 2015

a) The distance from the transcription start site is represented in base pairs from the 0 in the ...

Differential DNA methylated region (DMR) CPG density distribution.

Mohan Manikkam (131789)
Carlos Guerrero-Bosagna (131795)
Rebecca Tracey (131793)
Md. M. Haque (136011)
Michael K. Skinner (131798)

February 2012

The CpG density (CpG/100 bp) associated with all exposure DMR are presented with number of DMR on...

CpG density plot showing number of predicted DMR sites correlated with CpG density.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

(A) CpG density from the potential predicted germ cell DMR sites (3,234) when DHVPP is used as th...

Distribution of the differentially methylated regions.

Daniela L. Buscariollo (140729)
Xiefan Fang (514845)
Victoria Greenwood (514846)
Huiling Xue (274349)
Scott A. Rivkees (171942)
Christopher C. Wendler (171937)

January 2014

(A) A Venn diagram indicates the number of DMRs that are shared by different comparison groups. T...

Methylation profiles of 10,775 promoter region DM loci by DMRs and in relation to CpG islands.

Min-Ae Song (379924)
Maarit Tiirikainen (183149)
Sandi Kwee (379925)
Gordon Okimoto (379926)
Herbert Yu (379927)
Linda L. Wong (379928)

February 2013

A. Distribution of DM loci in CpG islands and the surrounding shore (0–2 kb from promoter ...

DNA methylation pattern of CpG dyads at repetitive elements in WT ESCs, MEFs, and embryonic liver.

Julia Arand (155279)
David Spieler (155282)
Tommy Karius (155285)
Miguel R. Branco (42502)
Daniela Meilinger (107843)
Alexander Meissner (11643)
Thomas Jenuwein (70681)
Guoliang Xu (67200)
Heinrich Leonhardt (18589)
Verena Wolf (155286)
Jörn Walter (37094)

June 2012

The bars sum up the DNA methylation status of all CpG dyads. The map next to the bar represents t...

Incidence of consensus motifs of known transcription factor binding sites in DMR from a variety of F3 generation exposure lineage sperm DNA.

Carlos Guerrero-Bosagna (131795)
Shelby Weeks (579158)
Michael K. Skinner (131798)

June 2014

Columns with (**) represent significant change with p<0.01, while columns with (*) represent sign...

Genomic chromosome locations of predicted DMR and overlap between germ cell and somatic cell predicted sites.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

(A) Germ cell DHVPP and somatic cell SG predicted number of (+3) sites in each chromosome. (B) Ge...

DMCs affect distinct genomic regions in IDH-mut and MLLr AMLs.

Altuna Akalin (28028)
Francine E. Garrett-Bakelman (156647)
Matthias Kormaksson (103832)
Jennifer Busuttil (156649)
Lu Zhang (50563)
Irina Khrebtukova (156652)
Thomas A. Milne (156654)
Yongsheng Huang (156655)
Debabrata Biswas (156656)
Jay L. Hess (156657)
C. David Allis (156658)
Robert G. Roeder (156660)
Peter J. M. Valk (156662)
Bob Löwenberg (5648797)
Ruud Delwel (65976)
Hugo F. Fernandez (156665)
Elisabeth Paietta (88750)
Martin S. Tallman (156670)
Gary P. Schroth (156674)
Christopher E. Mason (152583)
Ari Melnick (88754)
Maria E. Figueroa (88744)

June 2012

(A) Top: cartoon representation of the different genomic regions analyzed. Bottom: Pie charts ill...

Chromosomal localization of differential DNA methylation regions (DMR), differential expressed genes, and clusters of gene expression.

Carlos Guerrero-Bosagna (131795)
Marina Savenkova (395845)
Md. Muksitul Haque (395846)
Eric Nilsson (166681)
Michael K. Skinner (131798)

March 2013

The chromosomal number and relative size are presented. The DMR (arrow), gene expression changes ...

Chromosomal plot of somatic cell dataset SG shows the predicted 3+ sites and the clusters.

M. Muksitul Haque (603976)
Lawrence B. Holder (827061)
Michael K. Skinner (131798)

November 2015

Potential predicted DMR sites (1,503) when SG is used as the training set to predict on the rest ...

Generation of a genomic tiling array of the human Major Histocompatibility Complex (MHC) and its application for DNA methylation analysis-6

Eleni M Tomazou (77342)
Vardhman K Rakyan (5233)
Gregory Lefebvre (77343)
Robert Andrews (30281)
Peter Ellis (15708)
David K Jackson (77344)
Cordelia Langford (77345)
Matthew D Francis (77346)
Liselotte Bäckdahl (77347)
Marcos Miretti (77348)
Penny Coggill (16745)
Diego Ottaviani (77349)
Denise Sheer (77350)
Adele Murrell (77351)
Stephan Beck (5246)

December 2011

E browser. Each vertical black line represents a putative tDMR. The high density of 18 tDMRs within ...

Putative DMRs of <i>H19.</i>

Abstract

Extracted data

Putative DMRs of <i>H19.</i>

Abstract

Extracted data

Related items

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