<p>The PMF profiles correspond to the right-handed structure of the dimers in both bilayers. The PMF profile evaluated for the left-handed structure of the PLXA1 homodimer seen in the DOPC bilayer is shown.</p
PMF & Histogram data for CActd/CActd and MA/CActd complexes- md_pull.mdp Gromacs' molecular dynamics...
<p>Key interfacing residues depicted on the contact maps (<a href="http://www.plosone.org/article/in...
Potential of mean force (PMF) calculations are used to characterize the free energy landscape of pro...
<p>The PMFs correspond to the separation of the monomers associated in right-handed interactions (R)...
<p>Top: right-handed structure of the NRP1 homodimer and the NRP1-PLXA1 heterodimer. Bottom: left-ha...
A. The Potential of Mean Force (PMF) is shown with bootstrap error bars (green) for HD5 insertion in...
<p>The four combinations are for angles of: ; ; ; and (in <i>A</i>, <i>B</i>, <i>C</i>, and <i>D</i...
<p>Black, red, and blue lines in each figure refer to PMFs from Im-DPD, Ex-DPD, and AAMD [<a href="h...
<p>Umbrella sampling simulations of dimer formation of 2 TM domain dimers in DMPC/DLPC bilayers. Sim...
<p>(a) Mass density and (b) potential of mean force (PMF) profiles in a DOPC/20%Chol bilayer. Thick ...
<p>The total simulation time is the sum of the simulation time of the separate MDs. The number in pa...
We introduce PMF*, a novel Potential of Mean Force (PMF) for the Ramachandran Φ/Ψ-dihedral plot of t...
International audienceWe report the calculation of the potential of mean force (PMF) of different ty...
64, 256, or 1024 lipids. CHARMM36 force field. Topologies for SOPC, DOPC, and POPC from CHARMM-GUI...
Potential of mean force (PMF) calculations are used to characterize the free energy landscape of pro...
PMF & Histogram data for CActd/CActd and MA/CActd complexes- md_pull.mdp Gromacs' molecular dynamics...
<p>Key interfacing residues depicted on the contact maps (<a href="http://www.plosone.org/article/in...
Potential of mean force (PMF) calculations are used to characterize the free energy landscape of pro...
<p>The PMFs correspond to the separation of the monomers associated in right-handed interactions (R)...
<p>Top: right-handed structure of the NRP1 homodimer and the NRP1-PLXA1 heterodimer. Bottom: left-ha...
A. The Potential of Mean Force (PMF) is shown with bootstrap error bars (green) for HD5 insertion in...
<p>The four combinations are for angles of: ; ; ; and (in <i>A</i>, <i>B</i>, <i>C</i>, and <i>D</i...
<p>Black, red, and blue lines in each figure refer to PMFs from Im-DPD, Ex-DPD, and AAMD [<a href="h...
<p>Umbrella sampling simulations of dimer formation of 2 TM domain dimers in DMPC/DLPC bilayers. Sim...
<p>(a) Mass density and (b) potential of mean force (PMF) profiles in a DOPC/20%Chol bilayer. Thick ...
<p>The total simulation time is the sum of the simulation time of the separate MDs. The number in pa...
We introduce PMF*, a novel Potential of Mean Force (PMF) for the Ramachandran Φ/Ψ-dihedral plot of t...
International audienceWe report the calculation of the potential of mean force (PMF) of different ty...
64, 256, or 1024 lipids. CHARMM36 force field. Topologies for SOPC, DOPC, and POPC from CHARMM-GUI...
Potential of mean force (PMF) calculations are used to characterize the free energy landscape of pro...
PMF & Histogram data for CActd/CActd and MA/CActd complexes- md_pull.mdp Gromacs' molecular dynamics...
<p>Key interfacing residues depicted on the contact maps (<a href="http://www.plosone.org/article/in...
Potential of mean force (PMF) calculations are used to characterize the free energy landscape of pro...