Methylation patterns of known germ cell markers (A–D) and significant DMRs for both cell lines (E, F).
- Yvonne G. van der Zwan (150392)
- Martin A. Rijlaarsdam (571370)
- Fernando J. Rossello (463396)
- Amanda J. Notini (571371)
- Suzan de Boer (150413)
- D. Neil Watkins (61722)
- Ad J. M. Gillis (401562)
- Lambert C. J. Dorssers (505758)
- Stefan J. White (168397)
- Leendert H. J. Looijenga (140243)
Publication date
June 2014
DOIAbstract
<p>Dots depict individual CpGs and black boxes denote DMRs identified by DMRforPairs. Percentages below indicate average CG density in the plotted regions (calculated using the Repitools R package, gcContentCalc function (<a href="http://www.bioconductor.org/" target="_blank">http://www.bioconductor.org/</a>)). (A) <i>SOX2</i> [44%], (B) <i>SOX17</i> [46%], (C) <i>OCT3/4</i> (<i>POU5F1</i>), [52%] (D) <i>NANOG</i>, [44%] (E) <i>miR-371/2/3</i> cluster, [49%] (F) <i>GATA4</i> [53%].</p
Add to ORKG