Selected pathways enriched by GSEA analysis.

Sandor Haas-Neil (13924772)
Anna Dvorkin-Gheva (201099)
Paul Forsythe (302893)

October 2022

(GSEA) showing significantly (adjusted P-value < 0.05) modified pathways between all 4 exploration d...

Significant pathways identified in active CD compared to remission CD subjects according to GSEA analysis using KEGG pathways.

Maureen M. Leonard (6612158)
Yu Bai (258833)
Gloria Serena (178439)
Kourtney P. Nickerson (112226)
Stephanie Camhi (6612161)
Craig Sturgeon (178441)
Shu Yan (394046)
Maria R. Fiorentino (5857658)
Aubrey Katz (6612164)
Barbara Nath (6612167)
James Richter (3706711)
Matthew Sleeman (193597)
Cagan Gurer (6612170)
Alessio Fasano (178455)

April 2019

Pathways significantly altered in patients with active CD compared to remission CD per GSEA are show...

Gene expression data analysed using gene set enrichment analysis (GSEA) to extract biological information.

Jungho Yang (5683643)
Kyueng-Whan Min (5683646)
Dong-Hoon Kim (5683649)
Byoung Kwan Son (5683652)
Kyoung Min Moon (5683655)
Young Chan Wi (5683658)
Seong Sik Bang (5683661)
Young Ha Oh (5683664)
Sung-Im Do (5683667)
Seoung Wan Chae (229254)
Sukjoong Oh (5683670)
Young Hwan Kim (132717)
Mi Jung Kwon (5683673)

August 2018

In each thumbnail, the green curve represents the evolution of the density of the genes identified i...

Selected pathways enriched by SNEA analysis.

Jing Zhang (23775)
Lisa Carnduff (618076)
Grant Norman (618077)
Tyson Josey (618078)
Yushan Wang (618079)
Thomas W. Sawyer (618080)
Christopher J. Martyniuk (243374)
Valerie S. Langlois (618081)

August 2014

Red indicates that the gene is increased and green indicates that the gene is decreased in mRNA l...

Pathways enriched in genes upregulated (A) and downregulated (B) after surgery-induced weight loss.

Christine Poitou (48263)
Claire Perret (194152)
François Mathieu (734248)
Vinh Truong (207097)
Yuna Blum (734249)
Hervé Durand (734250)
Rohia Alili (154219)
Nadjim Chelghoum (734251)
Véronique Pelloux (37669)
Judith Aron-Wisnewsky (544060)
Adriana Torcivia (734252)
Jean-Luc Bouillot (297490)
Brian W. Parks (734253)
Ewa Ninio (276038)
Karine Clément (2150893)
Laurence Tiret (133737)

May 2015

The x axis indicates the significance of the GSEA score test for enrichment in the given p...

GSEA analysis revealed the pathway enriched in UPF3B high and low expression phenotype.

Jianduo Xu (13905621)
Hongqing Ma (12886118)
Baoen Shan (442100)

October 2022

(A) GSEA analysis in KEGG gene sets. (B) GSEA analysis in GO gene sets. (C) GSEA analysis in Reactom...

Results of GSEA analysis (Hallmark Collection database) of pathways and biological processes that differed significantly between N42 cells transfected with scramble or Pgrmc1 siRNA.

Karlie A. Intlekofer (6640340)
Kelsey Clements (6640343)
Haley Woods (6640346)
Hillary Adams (6640349)
Alexander Suvorov (3466646)
Sandra L. Petersen (5905019)

April 2019

Pathways were considered significant if the normalized enrichment score was at least 1.5-fold and no...

Gene set enrichment analysis (GSEA) of top 3 pathways enriched at days 3, 14, and 30 IR compared to untreated in HILIC and RP phases using (Padj<0.25) for statistical significance.

Lauren G. Buss (17419758)
Diogo De Oliveira Pessoa (17419761)
Justin M. Snider (17419764)
Megha Padi (127447)
Jessica A. Martinez (2297254)
Kirsten H. Limesand (8057579)

November 2023

Gene set enrichment analysis (GSEA) of top 3 pathways enriched at days 3, 14, and 30 IR compared to ...

Molecular pathways related to the genes commonly modulated by chlorophyllin and ellagic acid supplementation.

Ramamurthi Vidya Priyadarsini (173946)
Neeraj Kumar (109718)
Imran Khan (109715)
Paranthaman Thiyagarajan (173957)
Paturu Kondaiah (73230)
Siddavaram Nagini (173964)

April 2012

Genes commonly modulated by chlorophyllin and ellagic acid in the enriched pathways (z-score >2) ...

Pathway analysis of transcript abundance.

Marcela Preininger (390046)
Dalia Arafat (390047)
Jinhee Kim (233831)
Artika P. Nath (390048)
Youssef Idaghdour (44750)
Kenneth L. Brigham (390049)
Greg Gibson (4110)

March 2013

The relative transcript abundance of 51 transcripts in the KEGG TLR signaling pathway (map04620) ...

Inflammatory responses enriched by GO term analysis.

Jing Zhang (23775)
Lisa Carnduff (618076)
Grant Norman (618077)
Tyson Josey (618078)
Yushan Wang (618079)
Thomas W. Sawyer (618080)
Christopher J. Martyniuk (243374)
Valerie S. Langlois (618081)

August 2014

Red indicates that the gene is increased and green indicates that the gene is decreased in mRNA l...

Gene Ontology (GO) biological process (BP) and KEGG pathway categories enriched (FDR-adjusted P-value < 0.05) among the genes over- and under-expressed in the StCo-StHi contrast detected using GSEA.

Pan Zhang (206408)
Justin S. Rhodes (210602)
Theodore Garland Jr. (350095)
Sam D. Perez (3366563)
Bruce R. Southey (19329)
Sandra L. Rodriguez-Zas (19332)

August 2018

Gene Ontology (GO) biological process (BP) and KEGG pathway categories enriched (FDR-adjusted P-v...

GSEA analysis of microarray data showing enrichment of the JAK-STAT and MAP Kinase pathways and upregulation of ECM structural component genes along with qRT-PCR validation of the down-regulation of topoisomerase 2 gene expression in MCF7VP cells.

Karobi Moitra (136627)
Kate Im (136630)
Katy Limpert (136632)
Alexander Borsa (136634)
Julie Sawitzke (136636)
Rob Robey (136638)
Naoya Yuhki (26789)
Ram Savan (136641)
Da Wei Huang (47353)
Richard A. Lempicki (17050)
Susan Bates (136646)
Michael Dean (17049)

September 2012

Fig. 5A. Gene set enrichment analysis of microrray data depicting the enrichment of genes in the ...

Pathways analysis of transcriptomic perturbations implicates MAPK signaling.

Leah E. Worton (457030)
Brandon J. Ausk (242214)
Leah M. Downey (457031)
Steven D. Bain (242220)
Edith M. Gardiner (457032)
Sundar Srinivasan (242213)
Ted S. Gross (242227)
Ronald Y. Kwon (330294)

September 2013

(A–B): Results from KEGG analysis for Groups A and B. Group A was significantly associated with M...

Distinct signaling pathways of the MSCs under stimulatory and non-stimulatory conditions.

Jung-Ho Kim (257402)
Ho-Sun Lee (3605294)
Hyun-Kyung Choi (2459596)
Jin-A Kim (3337617)
In-Sun Chu (81623)
Sun-Hee Leem (81627)
Il-Hoan Oh (456853)

December 2016

Three independent lines of hMSCs cultured under different conditions were subjected to microarray...

Gene set enrichment analysis.

Sandor Haas-Neil (13924772)
Anna Dvorkin-Gheva (201099)
Paul Forsythe (302893)

October 2022

(GSEA) showing significantly (adjusted P-value < 0.05) modified pathways between all 4 exploration d...

Significant pathways identified in active CD compared to remission CD subjects according to GSEA analysis using KEGG pathways.

Maureen M. Leonard (6612158)
Yu Bai (258833)
Gloria Serena (178439)
Kourtney P. Nickerson (112226)
Stephanie Camhi (6612161)
Craig Sturgeon (178441)
Shu Yan (394046)
Maria R. Fiorentino (5857658)
Aubrey Katz (6612164)
Barbara Nath (6612167)
James Richter (3706711)
Matthew Sleeman (193597)
Cagan Gurer (6612170)
Alessio Fasano (178455)

April 2019

Pathways significantly altered in patients with active CD compared to remission CD per GSEA are show...

Gene expression data analysed using gene set enrichment analysis (GSEA) to extract biological information.

Jungho Yang (5683643)
Kyueng-Whan Min (5683646)
Dong-Hoon Kim (5683649)
Byoung Kwan Son (5683652)
Kyoung Min Moon (5683655)
Young Chan Wi (5683658)
Seong Sik Bang (5683661)
Young Ha Oh (5683664)
Sung-Im Do (5683667)
Seoung Wan Chae (229254)
Sukjoong Oh (5683670)
Young Hwan Kim (132717)
Mi Jung Kwon (5683673)

August 2018

In each thumbnail, the green curve represents the evolution of the density of the genes identified i...

Selected pathways enriched by SNEA analysis.

Jing Zhang (23775)
Lisa Carnduff (618076)
Grant Norman (618077)
Tyson Josey (618078)
Yushan Wang (618079)
Thomas W. Sawyer (618080)
Christopher J. Martyniuk (243374)
Valerie S. Langlois (618081)

August 2014

Red indicates that the gene is increased and green indicates that the gene is decreased in mRNA l...

Pathways enriched in genes upregulated (A) and downregulated (B) after surgery-induced weight loss.

Christine Poitou (48263)
Claire Perret (194152)
François Mathieu (734248)
Vinh Truong (207097)
Yuna Blum (734249)
Hervé Durand (734250)
Rohia Alili (154219)
Nadjim Chelghoum (734251)
Véronique Pelloux (37669)
Judith Aron-Wisnewsky (544060)
Adriana Torcivia (734252)
Jean-Luc Bouillot (297490)
Brian W. Parks (734253)
Ewa Ninio (276038)
Karine Clément (2150893)
Laurence Tiret (133737)

May 2015

The x axis indicates the significance of the GSEA score test for enrichment in the given p...

GSEA analysis revealed the pathway enriched in UPF3B high and low expression phenotype.

Jianduo Xu (13905621)
Hongqing Ma (12886118)
Baoen Shan (442100)

October 2022

(A) GSEA analysis in KEGG gene sets. (B) GSEA analysis in GO gene sets. (C) GSEA analysis in Reactom...

Results of GSEA analysis (Hallmark Collection database) of pathways and biological processes that differed significantly between N42 cells transfected with scramble or Pgrmc1 siRNA.

Karlie A. Intlekofer (6640340)
Kelsey Clements (6640343)
Haley Woods (6640346)
Hillary Adams (6640349)
Alexander Suvorov (3466646)
Sandra L. Petersen (5905019)

April 2019

Pathways were considered significant if the normalized enrichment score was at least 1.5-fold and no...

Gene set enrichment analysis (GSEA) of top 3 pathways enriched at days 3, 14, and 30 IR compared to untreated in HILIC and RP phases using (Padj<0.25) for statistical significance.

Lauren G. Buss (17419758)
Diogo De Oliveira Pessoa (17419761)
Justin M. Snider (17419764)
Megha Padi (127447)
Jessica A. Martinez (2297254)
Kirsten H. Limesand (8057579)

November 2023

Gene set enrichment analysis (GSEA) of top 3 pathways enriched at days 3, 14, and 30 IR compared to ...

Molecular pathways related to the genes commonly modulated by chlorophyllin and ellagic acid supplementation.

Ramamurthi Vidya Priyadarsini (173946)
Neeraj Kumar (109718)
Imran Khan (109715)
Paranthaman Thiyagarajan (173957)
Paturu Kondaiah (73230)
Siddavaram Nagini (173964)

April 2012

Genes commonly modulated by chlorophyllin and ellagic acid in the enriched pathways (z-score >2) ...

Pathway analysis of transcript abundance.

Marcela Preininger (390046)
Dalia Arafat (390047)
Jinhee Kim (233831)
Artika P. Nath (390048)
Youssef Idaghdour (44750)
Kenneth L. Brigham (390049)
Greg Gibson (4110)

March 2013

The relative transcript abundance of 51 transcripts in the KEGG TLR signaling pathway (map04620) ...

Inflammatory responses enriched by GO term analysis.

Jing Zhang (23775)
Lisa Carnduff (618076)
Grant Norman (618077)
Tyson Josey (618078)
Yushan Wang (618079)
Thomas W. Sawyer (618080)
Christopher J. Martyniuk (243374)
Valerie S. Langlois (618081)

August 2014

Red indicates that the gene is increased and green indicates that the gene is decreased in mRNA l...

Gene Ontology (GO) biological process (BP) and KEGG pathway categories enriched (FDR-adjusted P-value < 0.05) among the genes over- and under-expressed in the StCo-StHi contrast detected using GSEA.

Pan Zhang (206408)
Justin S. Rhodes (210602)
Theodore Garland Jr. (350095)
Sam D. Perez (3366563)
Bruce R. Southey (19329)
Sandra L. Rodriguez-Zas (19332)

August 2018

Gene Ontology (GO) biological process (BP) and KEGG pathway categories enriched (FDR-adjusted P-v...

GSEA analysis of microarray data showing enrichment of the JAK-STAT and MAP Kinase pathways and upregulation of ECM structural component genes along with qRT-PCR validation of the down-regulation of topoisomerase 2 gene expression in MCF7VP cells.

Karobi Moitra (136627)
Kate Im (136630)
Katy Limpert (136632)
Alexander Borsa (136634)
Julie Sawitzke (136636)
Rob Robey (136638)
Naoya Yuhki (26789)
Ram Savan (136641)
Da Wei Huang (47353)
Richard A. Lempicki (17050)
Susan Bates (136646)
Michael Dean (17049)

September 2012

Fig. 5A. Gene set enrichment analysis of microrray data depicting the enrichment of genes in the ...

Pathways analysis of transcriptomic perturbations implicates MAPK signaling.

Leah E. Worton (457030)
Brandon J. Ausk (242214)
Leah M. Downey (457031)
Steven D. Bain (242220)
Edith M. Gardiner (457032)
Sundar Srinivasan (242213)
Ted S. Gross (242227)
Ronald Y. Kwon (330294)

September 2013

(A–B): Results from KEGG analysis for Groups A and B. Group A was significantly associated with M...

Distinct signaling pathways of the MSCs under stimulatory and non-stimulatory conditions.

Jung-Ho Kim (257402)
Ho-Sun Lee (3605294)
Hyun-Kyung Choi (2459596)
Jin-A Kim (3337617)
In-Sun Chu (81623)
Sun-Hee Leem (81627)
Il-Hoan Oh (456853)

December 2016

Three independent lines of hMSCs cultured under different conditions were subjected to microarray...

Gene set enrichment analysis.

Sandor Haas-Neil (13924772)
Anna Dvorkin-Gheva (201099)
Paul Forsythe (302893)

October 2022

(GSEA) showing significantly (adjusted P-value < 0.05) modified pathways between all 4 exploration d...

Significant pathways identified in active CD compared to remission CD subjects according to GSEA analysis using KEGG pathways.

Maureen M. Leonard (6612158)
Yu Bai (258833)
Gloria Serena (178439)
Kourtney P. Nickerson (112226)
Stephanie Camhi (6612161)
Craig Sturgeon (178441)
Shu Yan (394046)
Maria R. Fiorentino (5857658)
Aubrey Katz (6612164)
Barbara Nath (6612167)
James Richter (3706711)
Matthew Sleeman (193597)
Cagan Gurer (6612170)
Alessio Fasano (178455)

April 2019

Pathways significantly altered in patients with active CD compared to remission CD per GSEA are show...

Gene expression data analysed using gene set enrichment analysis (GSEA) to extract biological information.

Jungho Yang (5683643)
Kyueng-Whan Min (5683646)
Dong-Hoon Kim (5683649)
Byoung Kwan Son (5683652)
Kyoung Min Moon (5683655)
Young Chan Wi (5683658)
Seong Sik Bang (5683661)
Young Ha Oh (5683664)
Sung-Im Do (5683667)
Seoung Wan Chae (229254)
Sukjoong Oh (5683670)
Young Hwan Kim (132717)
Mi Jung Kwon (5683673)

August 2018

In each thumbnail, the green curve represents the evolution of the density of the genes identified i...

Selected pathways enriched by GSEA analysis.

Abstract

Extracted data

Selected pathways enriched by GSEA analysis.

Abstract

Extracted data

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