<p>qRT-PCR. A diagram of the genomic locus with the indicated snoRNA genes is shown at the top of each panel. Individual snoRNA genes are represented as yellow arrows. Red bars above the diagram represent probes detected in the tiling analysis. Green arrows above or below the diagram depict the location of qRT-PCR primers. The corresponding qRT-PCR results for each primer pair are given as fold-change relative to WT in the histograms below each diagram. <i>mtr4-1</i> in red, <i>mtr4-2</i> in orange, <i>hen2-2</i> in light green, <i>hen2-4</i> in dark green, <i>RRP41</i> control in light grey, <i>RRP41</i> RNAi in dark grey. Error bars = SD in three biological replicates.</p
<p>RNA was extracted from 4d dark-grown seedlings in different genetic backgrounds. Three biological...
<p>In each panel, the location of the fragments cloned is indicated below the gene model. Above the ...
<p>qRT-PCR experiments to test the upregulation of regions that mapped within the body and beyond an...
<p>qRT-PCR analysis. A diagram of the genomic locus indicated by the respective AGI number is shown ...
<p><b>A</b> qRT-PCR. The diagram shows the At1g79170 locus. The At1g79170 mRNA is represented as an ...
<p>Results are visualized using Integrated Genome Viewer. The total number of RNA-sequencing reads (...
<p>The top panel depicts the gene distribution across the entire PWS locus. Pink represents maternal...
<p>qRT-PCR experiments to validate the upregulation of regions located within introns. Primers pairs...
<p>(A) Sample plot of relative DNA:RNA hybrid occupancy at a tRNA gene on chromosome X. For A and D,...
<p>3′ RACE-PCR. A diagram of the At5g44306 locus is shown at the top. A blue arrow represents the At...
<p>(A) RNA blot assays of small RNAs in wild type and <i>henn-1</i> mutant embryos and adults. For e...
The grey-scale bars represent relative gene expression in control (dark grey) and treated plants (li...
<p>(a) A representation of pairwise <i>r<sup>2</sup></i> values (a measure of LD) all polymorphic si...
<p>A. The relative level of U3 snoRNA precursor in 5122 strains, ordered from the highest to lowest....
<p>(A) Schematic representation of the position in which sRNAs mapped to the selected genes. Each ba...
<p>RNA was extracted from 4d dark-grown seedlings in different genetic backgrounds. Three biological...
<p>In each panel, the location of the fragments cloned is indicated below the gene model. Above the ...
<p>qRT-PCR experiments to test the upregulation of regions that mapped within the body and beyond an...
<p>qRT-PCR analysis. A diagram of the genomic locus indicated by the respective AGI number is shown ...
<p><b>A</b> qRT-PCR. The diagram shows the At1g79170 locus. The At1g79170 mRNA is represented as an ...
<p>Results are visualized using Integrated Genome Viewer. The total number of RNA-sequencing reads (...
<p>The top panel depicts the gene distribution across the entire PWS locus. Pink represents maternal...
<p>qRT-PCR experiments to validate the upregulation of regions located within introns. Primers pairs...
<p>(A) Sample plot of relative DNA:RNA hybrid occupancy at a tRNA gene on chromosome X. For A and D,...
<p>3′ RACE-PCR. A diagram of the At5g44306 locus is shown at the top. A blue arrow represents the At...
<p>(A) RNA blot assays of small RNAs in wild type and <i>henn-1</i> mutant embryos and adults. For e...
The grey-scale bars represent relative gene expression in control (dark grey) and treated plants (li...
<p>(a) A representation of pairwise <i>r<sup>2</sup></i> values (a measure of LD) all polymorphic si...
<p>A. The relative level of U3 snoRNA precursor in 5122 strains, ordered from the highest to lowest....
<p>(A) Schematic representation of the position in which sRNAs mapped to the selected genes. Each ba...
<p>RNA was extracted from 4d dark-grown seedlings in different genetic backgrounds. Three biological...
<p>In each panel, the location of the fragments cloned is indicated below the gene model. Above the ...
<p>qRT-PCR experiments to test the upregulation of regions that mapped within the body and beyond an...