Additional file 1: Table S1–S3. of Exploring evidence of positive selection reveals genetic basis of meat quality traits in Berkshire pigs through whole genome sequencing

The result summary of sequence reads mapping using Bowtie2. Table S4. List of candidate genes resulted from genome-wide positive selection scan. Table S5. Information of genes which are previously reported as meat quality related genes. Descriptions of the gene functions are based on GeneCard. Table S6. The summary statistics of assembled contigs for Berkshire, Landrace, and Yorkshire using IDBA_UD. Table S7. The result summary of assembled contigs’ repeated and transposable elements for Berkshire, Landrace, and Yorkshire; and Berkshire assembled contigs of which unmapped reads were aligned. Table S8. The alignment mapping summary of unmapped sequencing reads to the Berkshire assembled contigs. (The unmapped sequencing reads were defined as the ones that were not mapped to the reference genome and to the Landrace and Yorkshire assembled contigs.). (DOCX 61 kb