<p>Notes: MiSeq values that differ from HiSeq's values are presented in parentheses. These mutation percentages were calculated per comparison to their published sequences. (See accession numbers in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0138650#sec002" target="_blank">Materials and Methods</a> paragraph.) nt: Nucleotide, aa: Amino-acid.</p
<p>* Changes are defined as being within coding regions or at intron-exon boundaries and have a Phre...
Percentage calculations in “Number of assemblies” column represent the number of assemblies containi...
<p> partis is shown both for single sequences (<i>k</i> = 1), and for a multi-HMM (<i>k</i> = 5), wh...
<p>Note: These mutation percentages were calculated per comparison of A/PR/8/34 strains 1 and 3 geno...
<p>Notes: The percentages obtained from RNA library followed by HiSeq sequencing are presented witho...
<p>Notes: The percentages obtained from RNA library followed by HiSeq sequencing are presented witho...
<p>*: Count of nucleotide location started 20 nucleotides (UTR) before the starting codon AUG.</p><p...
<p>Data are mean ± SEM.</p><p>Mutation rates are expressed as mutations per microsatellite per gener...
<p>(A, B) Number and distribution of mutations per clone after error-prone PCR mediated mutagenesis ...
<p>The fraction of mutations is plotted as a function of selection stringency (where a high tetracyc...
<p><b>A</b>. The probability of reporting a SNP at a single site as a function of the mutation call ...
The ratio between these two values is a measure for the degree by which context-dependent codon choi...
<p>Percentages are the proportion of tumors having a mutation within a subtype, e.g. 37% of Bronchio...
Analysis of nucleotide variation in the B. pseudomallei ΔqseBC mutant genome compared to the origina...
<p>“% C nucleotides mutated” indicates the proportion of nucleotides in either the CDR1/2 or FR1/2/3...
<p>* Changes are defined as being within coding regions or at intron-exon boundaries and have a Phre...
Percentage calculations in “Number of assemblies” column represent the number of assemblies containi...
<p> partis is shown both for single sequences (<i>k</i> = 1), and for a multi-HMM (<i>k</i> = 5), wh...
<p>Note: These mutation percentages were calculated per comparison of A/PR/8/34 strains 1 and 3 geno...
<p>Notes: The percentages obtained from RNA library followed by HiSeq sequencing are presented witho...
<p>Notes: The percentages obtained from RNA library followed by HiSeq sequencing are presented witho...
<p>*: Count of nucleotide location started 20 nucleotides (UTR) before the starting codon AUG.</p><p...
<p>Data are mean ± SEM.</p><p>Mutation rates are expressed as mutations per microsatellite per gener...
<p>(A, B) Number and distribution of mutations per clone after error-prone PCR mediated mutagenesis ...
<p>The fraction of mutations is plotted as a function of selection stringency (where a high tetracyc...
<p><b>A</b>. The probability of reporting a SNP at a single site as a function of the mutation call ...
The ratio between these two values is a measure for the degree by which context-dependent codon choi...
<p>Percentages are the proportion of tumors having a mutation within a subtype, e.g. 37% of Bronchio...
Analysis of nucleotide variation in the B. pseudomallei ΔqseBC mutant genome compared to the origina...
<p>“% C nucleotides mutated” indicates the proportion of nucleotides in either the CDR1/2 or FR1/2/3...
<p>* Changes are defined as being within coding regions or at intron-exon boundaries and have a Phre...
Percentage calculations in “Number of assemblies” column represent the number of assemblies containi...
<p> partis is shown both for single sequences (<i>k</i> = 1), and for a multi-HMM (<i>k</i> = 5), wh...