Additional file 1: Table S1. of Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Additional file 1: Table S1. of Evidence for common horizontal transmission of Wolbachia among butterflies and moths

Muhammad Ahmed (3436472)
Jesse Breinholt (3310689)
Akito Kawahara (3261399)

May 2016

All published publicly available MLST strains of Wolbachia used in this study (accessed March 2014 a...

Additional file 1: Table S1. of A set of genes conserved in sequence and expression traces back the establishment of multicellularity in social amoebae

Christina Schilde (2793856)
Hajara Lawal (2793862)
Angelika Noegel (3566684)
Ludwig Eichinger (11966)
Pauline Schaap (629913)
Gernot GlĂśckner (3566687)

November 2016

Gene set: The genes identified and additional information on orthology, detection method, and expres...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 2: Figure S1. of Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Gloria Barrera (468025)
Mariano Belaich (3564755)
Manuel Patarroyo (290368)
Laura Villamizar (468026)
Pablo Ghiringhelli (3564758)

November 2015

Sequence comparisons and structural analysis of homologous regions. The palindromes contained into t...

Additional file 1: Table S1. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

Predicted ORFs and repeat regions in the genome of DapuNPV. This file lists the ORFs predicted (with...

Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Barrera, Gloria Patricia
Nicolás Belaich, Mariano
Patarroyo, Manuel A.
Villamizar, Laura Fernanda
Ghiringhelli, Pablo Daniel

March 2019

Background: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA...

Additional file 2: Table S2. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

List of sequenced to date baculoviruses. This file lists all baculoviruses sequenced to date, with t...

Additional file 3: of Extensive horizontal gene transfers between plant pathogenic fungi

Huan Qiu (186879)
Guohong Cai (490597)
Jing Luo (146659)
Debashish Bhattacharya (35009)
Ning Zhang (23771)

May 2016

Magnaporthiopsis incrustans genes putatively derived from non-Pezizomycotina species via horizontal ...

Additional file 1: Table S1. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes for PHI genes family identified in O. polyrhachis-furcata and nineteen other fun...

Additional file 1: Table S1. of Blood-feeding, susceptibility to infection with Schmallenberg virus and phylogenetics of Culicoides (Diptera: Ceratopogonidae) from the United Kingdom

James Barber (195520)
Lara Harrup (3479171)
Rhiannon Silk (4896943)
Eva Veronesi (195523)
Simon Gubbins (63360)
Katarzyna Bachanek-Bankowska (199876)
Simon Carpenter (195515)

February 2018

GenBank sequences used in the genetic analyses of Obsoletus complex of Culicoides. Includes referenc...

Additional file 1: of Horizontal gene transfer is not a hallmark of the human genome

Steven Salzberg (3264042)

May 2017

Gene-by-gene analysis of evidence for horizontal gene transfer for all genes in Tables 1 and 2. (DOC...

Sequence comparison between three geographically distinct Spodoptera frugiperda multiple nucleopolyhedrovirus isolates: Detecting positively selected genes

Simón, Oihane
Palma, Leopoldo
Beperet, Inés
Muñoz, Delia
López-Ferber, Miguel
Caballero, Primitivo
Williams, Trevor G.

May 2011

10 p., 3 tables, 4 figures and referencesThe complete genomic sequence of a Nicaraguan plaque purifi...

Additional file 3: Figure S1. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

Alignment of OpMNPV p8.9 ORF and its homologue in DapuNPV genome. Large insertion after nucleotide 2...

Additional file 1: of Comparative genomic analysis of Staphylococcus lugdunensis shows a closed pan-genome and multiple barriers to horizontal gene transfer

Xavier Argemi (583943)
Dorota Matelska (4800786)
Krzysztof Ginalski (8940)
Philippe Riegel (5647739)
Yves Hansmann (583944)
Jochen Bloom (5647742)
Martine Pestel-Caron (497866)
Sandrine Dahyot (5647745)
JĂŠrĂŠmie Lebeurre (5647748)
Gilles PrĂŠvost (5647751)

August 2018

Pan-genome and core genome development projections for S. lugdunensis (A), S. epidermidis (B), and S...

Additional file 2: Table S1. of The first genome sequence of a metatherian herpesvirus: Macropodid herpesvirus 1

Paola Vaz (76616)
Timothy Mahony (3113472)
Carol Hartley (3068034)
Elizabeth Fowler (3114606)
Nino Ficorilli (776963)
Sang Lee (236493)
James Gilkerson (3068025)
Glenn Browning (3413369)
Joanne Devlin (3491738)

January 2016

Oligonucleotides used for ORF transcription studies of the unique hypothetical MaHV-1 ORFs (PW1 to P...

Additional file 1: Table S1. of Evidence for common horizontal transmission of Wolbachia among butterflies and moths

Muhammad Ahmed (3436472)
Jesse Breinholt (3310689)
Akito Kawahara (3261399)

May 2016

All published publicly available MLST strains of Wolbachia used in this study (accessed March 2014 a...

Additional file 1: Table S1. of A set of genes conserved in sequence and expression traces back the establishment of multicellularity in social amoebae

Christina Schilde (2793856)
Hajara Lawal (2793862)
Angelika Noegel (3566684)
Ludwig Eichinger (11966)
Pauline Schaap (629913)
Gernot GlĂśckner (3566687)

November 2016

Gene set: The genes identified and additional information on orthology, detection method, and expres...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 2: Figure S1. of Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Gloria Barrera (468025)
Mariano Belaich (3564755)
Manuel Patarroyo (290368)
Laura Villamizar (468026)
Pablo Ghiringhelli (3564758)

November 2015

Sequence comparisons and structural analysis of homologous regions. The palindromes contained into t...

Additional file 1: Table S1. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

Predicted ORFs and repeat regions in the genome of DapuNPV. This file lists the ORFs predicted (with...

Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Barrera, Gloria Patricia
Nicolás Belaich, Mariano
Patarroyo, Manuel A.
Villamizar, Laura Fernanda
Ghiringhelli, Pablo Daniel

March 2019

Background: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA...

Additional file 2: Table S2. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

List of sequenced to date baculoviruses. This file lists all baculoviruses sequenced to date, with t...

Additional file 3: of Extensive horizontal gene transfers between plant pathogenic fungi

Huan Qiu (186879)
Guohong Cai (490597)
Jing Luo (146659)
Debashish Bhattacharya (35009)
Ning Zhang (23771)

May 2016

Magnaporthiopsis incrustans genes putatively derived from non-Pezizomycotina species via horizontal ...

Additional file 1: Table S1. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes for PHI genes family identified in O. polyrhachis-furcata and nineteen other fun...

Additional file 1: Table S1. of Blood-feeding, susceptibility to infection with Schmallenberg virus and phylogenetics of Culicoides (Diptera: Ceratopogonidae) from the United Kingdom

James Barber (195520)
Lara Harrup (3479171)
Rhiannon Silk (4896943)
Eva Veronesi (195523)
Simon Gubbins (63360)
Katarzyna Bachanek-Bankowska (199876)
Simon Carpenter (195515)

February 2018

GenBank sequences used in the genetic analyses of Obsoletus complex of Culicoides. Includes referenc...

Additional file 1: of Horizontal gene transfer is not a hallmark of the human genome

Steven Salzberg (3264042)

May 2017

Gene-by-gene analysis of evidence for horizontal gene transfer for all genes in Tables 1 and 2. (DOC...

Sequence comparison between three geographically distinct Spodoptera frugiperda multiple nucleopolyhedrovirus isolates: Detecting positively selected genes

Simón, Oihane
Palma, Leopoldo
Beperet, Inés
Muñoz, Delia
López-Ferber, Miguel
Caballero, Primitivo
Williams, Trevor G.

May 2011

10 p., 3 tables, 4 figures and referencesThe complete genomic sequence of a Nicaraguan plaque purifi...

Additional file 3: Figure S1. of The genome of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV) reveals novel genetic connection between baculoviruses infecting moths of the Lymantriidae family

Martyna Krejmer (3404465)
Iwona Skrzecz (3404459)
Bartosz Wasag (3404468)
Boguslaw Szewczyk (683553)
Lukasz Rabalski (3404462)

October 2015

Alignment of OpMNPV p8.9 ORF and its homologue in DapuNPV genome. Large insertion after nucleotide 2...

Additional file 1: of Comparative genomic analysis of Staphylococcus lugdunensis shows a closed pan-genome and multiple barriers to horizontal gene transfer

Xavier Argemi (583943)
Dorota Matelska (4800786)
Krzysztof Ginalski (8940)
Philippe Riegel (5647739)
Yves Hansmann (583944)
Jochen Bloom (5647742)
Martine Pestel-Caron (497866)
Sandrine Dahyot (5647745)
JĂŠrĂŠmie Lebeurre (5647748)
Gilles PrĂŠvost (5647751)

August 2018

Pan-genome and core genome development projections for S. lugdunensis (A), S. epidermidis (B), and S...

Additional file 2: Table S1. of The first genome sequence of a metatherian herpesvirus: Macropodid herpesvirus 1

Paola Vaz (76616)
Timothy Mahony (3113472)
Carol Hartley (3068034)
Elizabeth Fowler (3114606)
Nino Ficorilli (776963)
Sang Lee (236493)
James Gilkerson (3068025)
Glenn Browning (3413369)
Joanne Devlin (3491738)

January 2016

Oligonucleotides used for ORF transcription studies of the unique hypothetical MaHV-1 ORFs (PW1 to P...

Additional file 1: Table S1. of Evidence for common horizontal transmission of Wolbachia among butterflies and moths

Muhammad Ahmed (3436472)
Jesse Breinholt (3310689)
Akito Kawahara (3261399)

May 2016

All published publicly available MLST strains of Wolbachia used in this study (accessed March 2014 a...

Additional file 1: Table S1. of A set of genes conserved in sequence and expression traces back the establishment of multicellularity in social amoebae

Christina Schilde (2793856)
Hajara Lawal (2793862)
Angelika Noegel (3566684)
Ludwig Eichinger (11966)
Pauline Schaap (629913)
Gernot GlĂśckner (3566687)

November 2016

Gene set: The genes identified and additional information on orthology, detection method, and expres...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 1: Table S1. of Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Abstract

Extracted data

Additional file 1: Table S1. of Evidence of recent interspecies horizontal gene transfer regarding nucleopolyhedrovirus infection of Spodoptera frugiperda

Abstract

Extracted data

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