Additional file 3: of Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1

Additional file 3: of Complete genome sequence of the Robinia pseudoacacia L. symbiont Mesorhizobium amorphae CCNWGS0123

Xinye Wang (420298)
Yantao Luo (4864198)
Dongying Liu (5766896)
Jiamei Wang (618995)
Shi Wei (1804564)
Liang Zhao (94728)

September 2018

Table S3. Genes participating in nitrogen synthesis and degradation. (DOCX 18 kb

Additional file 2: of Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai

Jingxin Zhang (737647)
John Hu (5944565)
Huifang Shen (1657891)
Yucheng Zhang (136327)
Dayuan Sun (3339438)
Xiaoming Pu (5944568)
Qiyun Yang (503880)
Qiurong Fan (5944571)
Birun Lin (381052)

November 2018

Calculation of isDDH between the genome sequences of D. fangzhongdai PA1 and other Dickeya strains. ...

Additional file 1: Table S1. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome

ClĂŠmence Plissonneau (4761663)
Fanny Hartmann (4761666)
Daniel Croll (325019)

January 2018

Chromosomal length variation between the five completely assembled genomes of Zymoseptoria tritici. ...

Additional file 2: of Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1

Hannes Horn (800397)
Alexander Keller (230345)
Ulrich Hildebrandt (480360)
Peter KĂ¤mpfer (3468242)
Markus Riederer (480361)
Ute Hentschel (480362)

January 2016

Orthologous gene comparison of Williamsia sp. ARP1 and three other actinomycete genomes. (PDF 58 kb

SHORT GENOME REPORT Open Access Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp.

Hannes Horn
Er Keller
Ulrich Hildebr
Peter Kämpfer
Markus Riederer
Ute Hentschel

August 2016

The Gram-positive actinomycete Williamsia sp. ARP1 was originally isolated from the Arabidopsis thal...

Draft genome of the \(Arabidopsis\) \(thaliana\) phyllosphere bacterium, \(Williamsia\) sp. ARP1

Horn, Hannes
Keller, Alexander
Hildebrandt, Ulrich
Kämpfer, Peter
Riederer, Markus
Hentschel, Ute

January 2016

The Gram-positive actinomycete \(Williamsia\) sp. ARP1 was originally isolated from the \(Arabidopsi...

Additional file 1: of Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai

Jingxin Zhang (737647)
John Hu (5944565)
Huifang Shen (1657891)
Yucheng Zhang (136327)
Dayuan Sun (3339438)
Xiaoming Pu (5944568)
Qiyun Yang (503880)
Qiurong Fan (5944571)
Birun Lin (381052)

November 2018

Phylogenetic analysis of Dickeya strains based on complete or draft genome sequences. Orthologous gr...

Additional file 3: Figure S1. of Complete genome sequence of Paenibacillus yonginensis DCY84T, a novel plant Symbiont that promotes growth via induced systemic resistance

Yeon-Ju Kim (622784)
Johan Sukweenadhi (4513249)
Ji Seok (4513240)
Chang Kang (4355239)
Eul-Su Choi (4513246)
Sathiyamoorthy Subramaniyam (2614864)
Deok Yang (4513243)

October 2017

Comparative genome analysis of P. yonginensis DCY84T and P. polymyxa M1 using the Artemis software a...

Additional file 4: of Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA

Inmaculada García-Romero (3462461)
Antonio Pérez-Pulido (3462458)
Yolanda González-Flores (3462464)
Francisca Reyes-Ramírez (458207)
Eduardo Santero (12083)
Belén Floriano (3462455)

February 2016

Genes present in TFA genomic regions highly similar to other α-proteobacteria genomes. (PDF 83 kb

Additional file 3: of High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1

Aliya Suleimanova (3489401)
Anna Toymentseva (3489410)
Eugenia Boulygina (3489407)
Sergey Kazakov (3489392)
Ayslu Mardanova (3489404)
Nelly Balaban (3489395)
Margarita Sharipova (3489398)

November 2015

Links and DNA sequences of phytase genes detected in Pantoea sp . 3.5.1 genome. (DOCX 14Â kb

Additional file 2: Table S2. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of amino acids content of Arthrobacter agilis strain L77 by HPLC. (DOCX 15Â kb

Additional file 1: Table S1. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of organic acid and sugars/polyols from Arthrobacter agilis strain L77 by HPLC...

Additional file 2: of Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies

Connor Fitzpatrick (5012867)
Patricia Lu-Irving (4911286)
Julia Copeland (4911280)
David Guttman (3524483)
Pauline Wang (3567824)
David Baltrus (5643674)
Katrina Dlugosch (3598367)
Marc Johnson (3271218)

August 2018

Table S3. NCBI GenBank accession numbers for the survey of chloroplast genomes. (XLSX 64 kb

Additional file 1: Table S1. of Complete genome sequence of Paenibacillus yonginensis DCY84T, a novel plant Symbiont that promotes growth via induced systemic resistance

Yeon-Ju Kim (622784)
Johan Sukweenadhi (4513249)
Ji Seok (4513240)
Chang Kang (4355239)
Eul-Su Choi (4513246)
Sathiyamoorthy Subramaniyam (2614864)
Deok Yang (4513243)

October 2017

Genome comparison of strain DCY84T and closest Paenibacillus strains. Table S2. COGs analysis of dir...

Additional file 3: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

Špela Alič (6200537)
Jacques Pédron (352958)
Tanja Dreo (65657)
Frédérique Gijsegem (6200540)

January 2019

Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the o...

Additional file 3: of Complete genome sequence of the Robinia pseudoacacia L. symbiont Mesorhizobium amorphae CCNWGS0123

Xinye Wang (420298)
Yantao Luo (4864198)
Dongying Liu (5766896)
Jiamei Wang (618995)
Shi Wei (1804564)
Liang Zhao (94728)

September 2018

Table S3. Genes participating in nitrogen synthesis and degradation. (DOCX 18 kb

Additional file 2: of Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai

Jingxin Zhang (737647)
John Hu (5944565)
Huifang Shen (1657891)
Yucheng Zhang (136327)
Dayuan Sun (3339438)
Xiaoming Pu (5944568)
Qiyun Yang (503880)
Qiurong Fan (5944571)
Birun Lin (381052)

November 2018

Calculation of isDDH between the genome sequences of D. fangzhongdai PA1 and other Dickeya strains. ...

Additional file 1: Table S1. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome

ClĂŠmence Plissonneau (4761663)
Fanny Hartmann (4761666)
Daniel Croll (325019)

January 2018

Chromosomal length variation between the five completely assembled genomes of Zymoseptoria tritici. ...

Additional file 2: of Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1

Hannes Horn (800397)
Alexander Keller (230345)
Ulrich Hildebrandt (480360)
Peter KĂ¤mpfer (3468242)
Markus Riederer (480361)
Ute Hentschel (480362)

January 2016

Orthologous gene comparison of Williamsia sp. ARP1 and three other actinomycete genomes. (PDF 58 kb

SHORT GENOME REPORT Open Access Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp.

Hannes Horn
Er Keller
Ulrich Hildebr
Peter Kämpfer
Markus Riederer
Ute Hentschel

August 2016

The Gram-positive actinomycete Williamsia sp. ARP1 was originally isolated from the Arabidopsis thal...

Draft genome of the \(Arabidopsis\) \(thaliana\) phyllosphere bacterium, \(Williamsia\) sp. ARP1

Horn, Hannes
Keller, Alexander
Hildebrandt, Ulrich
Kämpfer, Peter
Riederer, Markus
Hentschel, Ute

January 2016

The Gram-positive actinomycete \(Williamsia\) sp. ARP1 was originally isolated from the \(Arabidopsi...

Additional file 1: of Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai

Jingxin Zhang (737647)
John Hu (5944565)
Huifang Shen (1657891)
Yucheng Zhang (136327)
Dayuan Sun (3339438)
Xiaoming Pu (5944568)
Qiyun Yang (503880)
Qiurong Fan (5944571)
Birun Lin (381052)

November 2018

Phylogenetic analysis of Dickeya strains based on complete or draft genome sequences. Orthologous gr...

Additional file 3: Figure S1. of Complete genome sequence of Paenibacillus yonginensis DCY84T, a novel plant Symbiont that promotes growth via induced systemic resistance

Yeon-Ju Kim (622784)
Johan Sukweenadhi (4513249)
Ji Seok (4513240)
Chang Kang (4355239)
Eul-Su Choi (4513246)
Sathiyamoorthy Subramaniyam (2614864)
Deok Yang (4513243)

October 2017

Comparative genome analysis of P. yonginensis DCY84T and P. polymyxa M1 using the Artemis software a...

Additional file 4: of Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA

Inmaculada García-Romero (3462461)
Antonio Pérez-Pulido (3462458)
Yolanda González-Flores (3462464)
Francisca Reyes-Ramírez (458207)
Eduardo Santero (12083)
Belén Floriano (3462455)

February 2016

Genes present in TFA genomic regions highly similar to other α-proteobacteria genomes. (PDF 83 kb

Additional file 3: of High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1

Aliya Suleimanova (3489401)
Anna Toymentseva (3489410)
Eugenia Boulygina (3489407)
Sergey Kazakov (3489392)
Ayslu Mardanova (3489404)
Nelly Balaban (3489395)
Margarita Sharipova (3489398)

November 2015

Links and DNA sequences of phytase genes detected in Pantoea sp . 3.5.1 genome. (DOCX 14Â kb

Additional file 2: Table S2. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of amino acids content of Arthrobacter agilis strain L77 by HPLC. (DOCX 15Â kb

Additional file 1: Table S1. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of organic acid and sugars/polyols from Arthrobacter agilis strain L77 by HPLC...

Additional file 2: of Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies

Connor Fitzpatrick (5012867)
Patricia Lu-Irving (4911286)
Julia Copeland (4911280)
David Guttman (3524483)
Pauline Wang (3567824)
David Baltrus (5643674)
Katrina Dlugosch (3598367)
Marc Johnson (3271218)

August 2018

Table S3. NCBI GenBank accession numbers for the survey of chloroplast genomes. (XLSX 64 kb

Additional file 1: Table S1. of Complete genome sequence of Paenibacillus yonginensis DCY84T, a novel plant Symbiont that promotes growth via induced systemic resistance

Yeon-Ju Kim (622784)
Johan Sukweenadhi (4513249)
Ji Seok (4513240)
Chang Kang (4355239)
Eul-Su Choi (4513246)
Sathiyamoorthy Subramaniyam (2614864)
Deok Yang (4513243)

October 2017

Genome comparison of strain DCY84T and closest Paenibacillus strains. Table S2. COGs analysis of dir...

Additional file 3: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

Špela Alič (6200537)
Jacques Pédron (352958)
Tanja Dreo (65657)
Frédérique Gijsegem (6200540)

January 2019

Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the o...

Additional file 3: of Complete genome sequence of the Robinia pseudoacacia L. symbiont Mesorhizobium amorphae CCNWGS0123

Xinye Wang (420298)
Yantao Luo (4864198)
Dongying Liu (5766896)
Jiamei Wang (618995)
Shi Wei (1804564)
Liang Zhao (94728)

September 2018

Table S3. Genes participating in nitrogen synthesis and degradation. (DOCX 18 kb

Additional file 2: of Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai

Jingxin Zhang (737647)
John Hu (5944565)
Huifang Shen (1657891)
Yucheng Zhang (136327)
Dayuan Sun (3339438)
Xiaoming Pu (5944568)
Qiyun Yang (503880)
Qiurong Fan (5944571)
Birun Lin (381052)

November 2018

Calculation of isDDH between the genome sequences of D. fangzhongdai PA1 and other Dickeya strains. ...

Additional file 1: Table S1. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome

ClĂŠmence Plissonneau (4761663)
Fanny Hartmann (4761666)
Daniel Croll (325019)

January 2018

Chromosomal length variation between the five completely assembled genomes of Zymoseptoria tritici. ...

Additional file 3: of Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1

Abstract

Extracted data

Additional file 3: of Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1

Abstract

Extracted data

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