Manhattan plot and Q-Q plot displaying the GWAS results from the AIL experiment (binary (0/1) phenotypes). Genomic location is plotted against -log10(P). Genome-wide (Pâ<â0.05) and suggestive genome-wide thresholds are shown as dashed lines. QâQ plot (below) of observed P-values against the expected P-values for Campylobacter gut colonisation level. (PPTX 1524Â kb
Figure S1. Variation in recombination rate within 0.5-Mb windows across the 28 autosomes (except GGA...
Manhattan plot of the SNP effect distribution within each significant window for abdominal fat perce...
Comparison of the ~93-kb inverted region of C. jejuni strains 00â2425 and NCTC11168. (DOCX 26 kb
Levels of C. jejuni colonisation in the caeca of line 61, line N, back-cross and advanced intercross...
Genes located in the QTL candidate regions for Campylobacter colonisation resistance. (XLSX 27Â kb
Linkage disequilibrium (LD) pattern for significant SNPs on chromosome 4. LD between SNPs in the 0.4...
Mean weights of the broiler chickens from each experimental group. The mean live weights (SEM) of th...
The relative abundances 16S rRNA gene sequences of the most abundant phyla from the chicken ceca. Th...
Figure S1. Bacterial taxa that are differentially abundant in the microbial community of fecal sampl...
Homopolymeric G/C tracts eight nucleotides or longer in selected whole genome-sequenced C. jejuni. (...
Differential abundance of members of the cecal microbial communities in the development of TEG C. je...
Images of ileum H and E stained sections. Sections from non-infected control birds at 8 da (A), 22 d...
Logarithm of odds curves for the region of chromosome 1 containing the two significant QTL, and a po...
Figure S1. Histogram plot of MD incidence (%) rate. MD resistance in chickens is generally evaluated...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Figure S1. Variation in recombination rate within 0.5-Mb windows across the 28 autosomes (except GGA...
Manhattan plot of the SNP effect distribution within each significant window for abdominal fat perce...
Comparison of the ~93-kb inverted region of C. jejuni strains 00â2425 and NCTC11168. (DOCX 26 kb
Levels of C. jejuni colonisation in the caeca of line 61, line N, back-cross and advanced intercross...
Genes located in the QTL candidate regions for Campylobacter colonisation resistance. (XLSX 27Â kb
Linkage disequilibrium (LD) pattern for significant SNPs on chromosome 4. LD between SNPs in the 0.4...
Mean weights of the broiler chickens from each experimental group. The mean live weights (SEM) of th...
The relative abundances 16S rRNA gene sequences of the most abundant phyla from the chicken ceca. Th...
Figure S1. Bacterial taxa that are differentially abundant in the microbial community of fecal sampl...
Homopolymeric G/C tracts eight nucleotides or longer in selected whole genome-sequenced C. jejuni. (...
Differential abundance of members of the cecal microbial communities in the development of TEG C. je...
Images of ileum H and E stained sections. Sections from non-infected control birds at 8 da (A), 22 d...
Logarithm of odds curves for the region of chromosome 1 containing the two significant QTL, and a po...
Figure S1. Histogram plot of MD incidence (%) rate. MD resistance in chickens is generally evaluated...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Figure S1. Variation in recombination rate within 0.5-Mb windows across the 28 autosomes (except GGA...
Manhattan plot of the SNP effect distribution within each significant window for abdominal fat perce...
Comparison of the ~93-kb inverted region of C. jejuni strains 00â2425 and NCTC11168. (DOCX 26 kb