Performance comparisons for the SVM using different selected sets of indices. Numbers in the parentheses indicate number of indices used in each analysis. (DOCX 22 kb
The file contains three sheets labelled Table S1 - S3. The tables list the genes that are currently ...
Contains the indices of the selected features for each protein class. (CSV 1.36 kb
Detailed analysis of the prediction accuracies of the test sets. Table S6. Percent of proteins in th...
Common overlapping indices of three PTM-specific optimized sets of indices. (DOCX 20 kb
List of known PTMs identified to be located inside/outside PPIRs after mapping process. (XLSX 677 kb
Definitions of true positives (TP), false positives (FP), true negatives (TN), and false negatives (...
Figure S1. The MCC score of the optimal feature subsets. Figure S2. AUC (area below ROC curve) chang...
Figure S1. Effect of E-value thresholds on combined prediction of traveler proteins. Figure S2. Comp...
A PDF containing the full results of the comparison to variant level predictors. (PDF 88 kb
Additional file 7: Table S6, which includes data related to Fig. 6 of this manuscript, namely simila...
Table S1. Performance comparison on known protein complexes using ClusterONE. Table S2. Performance ...
Additional file 9: Table S8, which includes data related to Additional file 1: Fig. S6 of this manus...
Distribution of InterPro functional domains covering S-sulfenylated sites. (DOCX 17Â kb
Supplementary Tables. This file provides the supplementary tables (Tables S1âS24) that illustrate ...
Table S1. The 31 informative physicochemical properties and their corresponding MED (main effect dif...
The file contains three sheets labelled Table S1 - S3. The tables list the genes that are currently ...
Contains the indices of the selected features for each protein class. (CSV 1.36 kb
Detailed analysis of the prediction accuracies of the test sets. Table S6. Percent of proteins in th...
Common overlapping indices of three PTM-specific optimized sets of indices. (DOCX 20 kb
List of known PTMs identified to be located inside/outside PPIRs after mapping process. (XLSX 677 kb
Definitions of true positives (TP), false positives (FP), true negatives (TN), and false negatives (...
Figure S1. The MCC score of the optimal feature subsets. Figure S2. AUC (area below ROC curve) chang...
Figure S1. Effect of E-value thresholds on combined prediction of traveler proteins. Figure S2. Comp...
A PDF containing the full results of the comparison to variant level predictors. (PDF 88 kb
Additional file 7: Table S6, which includes data related to Fig. 6 of this manuscript, namely simila...
Table S1. Performance comparison on known protein complexes using ClusterONE. Table S2. Performance ...
Additional file 9: Table S8, which includes data related to Additional file 1: Fig. S6 of this manus...
Distribution of InterPro functional domains covering S-sulfenylated sites. (DOCX 17Â kb
Supplementary Tables. This file provides the supplementary tables (Tables S1âS24) that illustrate ...
Table S1. The 31 informative physicochemical properties and their corresponding MED (main effect dif...
The file contains three sheets labelled Table S1 - S3. The tables list the genes that are currently ...
Contains the indices of the selected features for each protein class. (CSV 1.36 kb
Detailed analysis of the prediction accuracies of the test sets. Table S6. Percent of proteins in th...