Table S1. The 31 informative physicochemical properties and their corresponding MED (main effect difference) scores. (XLSX 42 kb
Figure S1. Boxplot of the RCs as function of the distance cut-off. Table S1. Evaluation of machine l...
Common overlapping indices of three PTM-specific optimized sets of indices. (DOCX 20 kb
Supplementary datasets for the paper "Improved annotation of enzyme encoding genes using deep learni...
Detailed analysis of the prediction accuracies of the test sets. Table S6. Percent of proteins in th...
Abstract Background Protein ubiquitination occurs when the ubiquitin protein binds to a target prote...
Table S5. - The independent test set for lysine acetylation. The table shows all independent test se...
It contains five folders: 1). PDB. Crystallographic structures of TM proteins in the TrainData, Inde...
local_feature_training_set.csv: Preprocessing data of feature extractor contains 65869 rows and 344 ...
The data presented in Tables S1 and S2 is the Biological Process and Molecular Function GO annotatio...
TermsMapped.xls, this file contains the mapping performed for the 105 terms from 25 PubMed titles/ab...
The propensity score of residues interacting with various carbohydrates. Figure S2. A web logo of AT...
Additional file 1. Table S-1. Comparison of different architectures of deep neural networks. Table S...
Results of testing DeepBind and catRAPID on RNA sequences of 25 and 51 nucleotides. RBP-binding sequ...
Table S1. Detail of 128 protein complexes with known binding affinity values used as training datase...
Table S1. The performance of six combined features without F-score. The table shows the performance ...
Figure S1. Boxplot of the RCs as function of the distance cut-off. Table S1. Evaluation of machine l...
Common overlapping indices of three PTM-specific optimized sets of indices. (DOCX 20 kb
Supplementary datasets for the paper "Improved annotation of enzyme encoding genes using deep learni...
Detailed analysis of the prediction accuracies of the test sets. Table S6. Percent of proteins in th...
Abstract Background Protein ubiquitination occurs when the ubiquitin protein binds to a target prote...
Table S5. - The independent test set for lysine acetylation. The table shows all independent test se...
It contains five folders: 1). PDB. Crystallographic structures of TM proteins in the TrainData, Inde...
local_feature_training_set.csv: Preprocessing data of feature extractor contains 65869 rows and 344 ...
The data presented in Tables S1 and S2 is the Biological Process and Molecular Function GO annotatio...
TermsMapped.xls, this file contains the mapping performed for the 105 terms from 25 PubMed titles/ab...
The propensity score of residues interacting with various carbohydrates. Figure S2. A web logo of AT...
Additional file 1. Table S-1. Comparison of different architectures of deep neural networks. Table S...
Results of testing DeepBind and catRAPID on RNA sequences of 25 and 51 nucleotides. RBP-binding sequ...
Table S1. Detail of 128 protein complexes with known binding affinity values used as training datase...
Table S1. The performance of six combined features without F-score. The table shows the performance ...
Figure S1. Boxplot of the RCs as function of the distance cut-off. Table S1. Evaluation of machine l...
Common overlapping indices of three PTM-specific optimized sets of indices. (DOCX 20 kb
Supplementary datasets for the paper "Improved annotation of enzyme encoding genes using deep learni...
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