Effect of laboratory and sequencing center variables on the probability of contamination, with the minimal cox1 divergence between contaminant and contaminated species being set to 10% instead of 5%. (XLS 6 kb
Additional file 1: Table S1. Log from ContID. Table S2. Summary of metric. Table S3. Pre-compute sum...
Samples removed from analysis in the comparison between BIGRED and hierarchical clustering due to lo...
Table S4. Accessions for sequencing runs, sequencing samples, and projects contained in GlobalBodysi...
Contaminant species-associated statistics. Each dot is for a contaminant species, that is, a species...
Effect of laboratory metadata, at least ten reads per contaminant. See legend to Fig. 3. Here, at l...
Figure S1. Single-gene phylogeny with multiple cross contaminations. Figure S2. Comparison between t...
An Excel table listing the contaminant genomes. List of JGI standard set of genomes that represent l...
International audienceBackground: Contamination is a well-known but often neglected problem in molec...
Table S3. Statistics and list of differentially expressed genes in samples inoculated with P. fluore...
: Table S4. Representative set of loci from GWAS simulations. Simulation parameters: technology = Af...
The numbers of CTXs in each sample after filtering process and chromosome coordinates of all CTXs. 1...
Figure S4. Levey-Jennings plots for bacterial genera over the course of 16 sequencing runs (x-axis, ...
Supplementary Tables. Table S1 lists the number of SNV and indel mutations found in each individual ...
Frequency of rs200757797 and rs2740090 in the 1000 Genomes continental groups. (DOCX 13.4 kb
Table S1. Number of read counts mapped to each clonal population within each CRISPR system. (XLSX 54...
Additional file 1: Table S1. Log from ContID. Table S2. Summary of metric. Table S3. Pre-compute sum...
Samples removed from analysis in the comparison between BIGRED and hierarchical clustering due to lo...
Table S4. Accessions for sequencing runs, sequencing samples, and projects contained in GlobalBodysi...
Contaminant species-associated statistics. Each dot is for a contaminant species, that is, a species...
Effect of laboratory metadata, at least ten reads per contaminant. See legend to Fig. 3. Here, at l...
Figure S1. Single-gene phylogeny with multiple cross contaminations. Figure S2. Comparison between t...
An Excel table listing the contaminant genomes. List of JGI standard set of genomes that represent l...
International audienceBackground: Contamination is a well-known but often neglected problem in molec...
Table S3. Statistics and list of differentially expressed genes in samples inoculated with P. fluore...
: Table S4. Representative set of loci from GWAS simulations. Simulation parameters: technology = Af...
The numbers of CTXs in each sample after filtering process and chromosome coordinates of all CTXs. 1...
Figure S4. Levey-Jennings plots for bacterial genera over the course of 16 sequencing runs (x-axis, ...
Supplementary Tables. Table S1 lists the number of SNV and indel mutations found in each individual ...
Frequency of rs200757797 and rs2740090 in the 1000 Genomes continental groups. (DOCX 13.4 kb
Table S1. Number of read counts mapped to each clonal population within each CRISPR system. (XLSX 54...
Additional file 1: Table S1. Log from ContID. Table S2. Summary of metric. Table S3. Pre-compute sum...
Samples removed from analysis in the comparison between BIGRED and hierarchical clustering due to lo...
Table S4. Accessions for sequencing runs, sequencing samples, and projects contained in GlobalBodysi...
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