An Excel table listing the contaminant genomes. List of JGI standard set of genomes that represent likely contaminations and therefore were filtered out in the sequence processing. (XLSX 10 kb
Supplemental tables. Microsoft Excel file containing three sheets (Tables S1â3) that contain the a...
Table S6. Cross-validation analysis. Scoring table for cross-validation analysis used to test specif...
Figure S2. The sequencing depth and relative abundance needed to detect eukaryotic genomes of variou...
An Excel table of Sequence statistics. Read count and base pairs for the different step in the seque...
An Excel table comparing taxonomic annotations to Mahnert et al. [26]. (XLSX 56 kb
A PDF figure showing significantly different KEGG Orthologs (KOs). 35 KEGG Orthologs that showed sig...
A PDF showing a heatmap of relative abundances. Heatmap of relative abundances of key enzymes, with ...
A PDF figure illustrating the reconstructed viral genomes. Whole genome alignment and phylogenetic t...
A PDF file containing the R script MCStats1.2. R script for statistical analysis of ecological commu...
Effect of laboratory and sequencing center variables on the probability of contamination, with the m...
Excel spreadsheet (.xlsx) listing assembly statistics of the six sequenced genomes before and filter...
Figure S1. Fungal contaminants are present in negative extraction controls. (A) Relative abundance o...
Table S3. The number of putative metagenomic phage contigs and non-phage contigs in metagenomic asse...
Additional file 1: Table S1. Composition and sequences of the synthetic DNA material sequins. Table ...
Table S3. Mapping-based abundance of eukaryote genomes in all samples. (CSV 24934 kb
Supplemental tables. Microsoft Excel file containing three sheets (Tables S1â3) that contain the a...
Table S6. Cross-validation analysis. Scoring table for cross-validation analysis used to test specif...
Figure S2. The sequencing depth and relative abundance needed to detect eukaryotic genomes of variou...
An Excel table of Sequence statistics. Read count and base pairs for the different step in the seque...
An Excel table comparing taxonomic annotations to Mahnert et al. [26]. (XLSX 56 kb
A PDF figure showing significantly different KEGG Orthologs (KOs). 35 KEGG Orthologs that showed sig...
A PDF showing a heatmap of relative abundances. Heatmap of relative abundances of key enzymes, with ...
A PDF figure illustrating the reconstructed viral genomes. Whole genome alignment and phylogenetic t...
A PDF file containing the R script MCStats1.2. R script for statistical analysis of ecological commu...
Effect of laboratory and sequencing center variables on the probability of contamination, with the m...
Excel spreadsheet (.xlsx) listing assembly statistics of the six sequenced genomes before and filter...
Figure S1. Fungal contaminants are present in negative extraction controls. (A) Relative abundance o...
Table S3. The number of putative metagenomic phage contigs and non-phage contigs in metagenomic asse...
Additional file 1: Table S1. Composition and sequences of the synthetic DNA material sequins. Table ...
Table S3. Mapping-based abundance of eukaryote genomes in all samples. (CSV 24934 kb
Supplemental tables. Microsoft Excel file containing three sheets (Tables S1â3) that contain the a...
Table S6. Cross-validation analysis. Scoring table for cross-validation analysis used to test specif...
Figure S2. The sequencing depth and relative abundance needed to detect eukaryotic genomes of variou...