<p>Only replicates with more than 15,000 reads were included from the samples Fine Sand (A; n = 5), Coarse Sand (B; n = 7) and Clay (C, n = 5). Panel D shows expected richness in pooled samples compared to mean expected replicate richness. Error bars represent standard error, for pooled samples calculated as described in Heck et al [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0179443#pone.0179443.ref047" target="_blank">47</a>].</p
<p>Rarefaction analysis was performed using the de-noised 454 pyrotag sequencing data on <i>de novo<...
<p>Calculation of microbial Richness, Equitability, and Shannon diversity among the pooled samples f...
<p>Box-plots cover 95% Bayesian confidence intervals of total OTU richness for each sample. Grey box...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Values rarefied to the number of reads of the smallest sample in each grouping are given for the ...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Mean silhouette scores were calculated based on repeated random selection of replicates to pool a...
Panel (a) shows species accumulation curves for the two simulated sampling units shown in Fig 1. The...
At each sampling depth 10 random samples were taken, and the distribution of Sequence Variant number...
<p>a) Rarefaction curves presenting the relationship between sequencing depth and species richness i...
Soil OTU table rarefied to 40,000 reads per sample, used for all analyses in the publication (Wagner...
<p>Black dots: the reference (empirical) samples. Solid lines: rarefaction curves. Dashed lines: ext...
Panel (a) shows species accumulation curves for the two simulated sampling units shown in Fig 3. The...
Panels (a) and (b) show maps derived from a simulation of two 100 x 100 km sampling units, and the c...
<p>(A) Normalized diversity (π/divergence) measured across the lowest 1%, 5%, 10% and 25% <i>B</i> q...
<p>Rarefaction analysis was performed using the de-noised 454 pyrotag sequencing data on <i>de novo<...
<p>Calculation of microbial Richness, Equitability, and Shannon diversity among the pooled samples f...
<p>Box-plots cover 95% Bayesian confidence intervals of total OTU richness for each sample. Grey box...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Values rarefied to the number of reads of the smallest sample in each grouping are given for the ...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Mean silhouette scores were calculated based on repeated random selection of replicates to pool a...
Panel (a) shows species accumulation curves for the two simulated sampling units shown in Fig 1. The...
At each sampling depth 10 random samples were taken, and the distribution of Sequence Variant number...
<p>a) Rarefaction curves presenting the relationship between sequencing depth and species richness i...
Soil OTU table rarefied to 40,000 reads per sample, used for all analyses in the publication (Wagner...
<p>Black dots: the reference (empirical) samples. Solid lines: rarefaction curves. Dashed lines: ext...
Panel (a) shows species accumulation curves for the two simulated sampling units shown in Fig 3. The...
Panels (a) and (b) show maps derived from a simulation of two 100 x 100 km sampling units, and the c...
<p>(A) Normalized diversity (π/divergence) measured across the lowest 1%, 5%, 10% and 25% <i>B</i> q...
<p>Rarefaction analysis was performed using the de-noised 454 pyrotag sequencing data on <i>de novo<...
<p>Calculation of microbial Richness, Equitability, and Shannon diversity among the pooled samples f...
<p>Box-plots cover 95% Bayesian confidence intervals of total OTU richness for each sample. Grey box...