Additional file 10: of Regulatory network changes between cell lines and their tissues of origin

Transcriptional targeting of genes in the pathways over-expressed for both cell lines. Boxplot of the gene in-degree differences for the genes in the specified pathway and for genes not in the pathway (*FDR < 0.05 t-test). Reduction of gene in-degree difference indicates that the genes in the pathway are less targeted by TFs in the cell line compared to its tissue of origin. (PDF 140 kb