Model parameters. Symbols, definitions, values, units and references for all model parameters are listed in the table here. (XLS 28Â kb
Reconstructed models in SBML format. The zipped file with 3 subfolders (cancer, monocyte and macroph...
Table S7. Human HCC tissue-derived metabolic genes (HMGs) mimicked by HLE or HUH7 cells upon compari...
Table S2. HCC-associated genes. Contains a set of genes often associated with HCC, including those r...
Formulations of the mathematical model. Descriptions for the ODEs and the modeling process are enclo...
Simulation results with additional regulation “Maff → Cdk2 (:Cyclin E)” with respect to Maff. Dynami...
Outcomes produced by other regulatory sturctures. Apparently false dynamics resulted by other hypoth...
Figure S1. Chemotherapy-induced niche contributes to the increase of ROS and apoptosis in HSCs. (a) ...
Supplemental data for illustrating the differentiation blockade in the hematopoietic cascade. (A). A...
List of model reactions and kinetic parameters. Table S2. Initial levels of the model species. (PDF ...
Figure S3. ChromHMM model of 15 chromtain states defined by all 8 histone modifications. (PDF 358Â k...
Supplemental data for illustrating the increased quiescence of HSCs. (A-B). Fitness of the models in...
The list of highly variable genes in the Bcl11a +/+ , sBcl11a +/+ and Bcl11a â/â HSC dataset and...
Cell cycle analysis of MDA-hyb1 and MDA-hyb2 cells. Cell cycle analysis was performed by DNA labelin...
Pathway analysis showing enrichment for genes involved in early B-cell function in our model. (PPT 1...
Figure S5. Spearman correlation of H3K36me3 occupancy and gene expression levels in all samples. (PD...
Reconstructed models in SBML format. The zipped file with 3 subfolders (cancer, monocyte and macroph...
Table S7. Human HCC tissue-derived metabolic genes (HMGs) mimicked by HLE or HUH7 cells upon compari...
Table S2. HCC-associated genes. Contains a set of genes often associated with HCC, including those r...
Formulations of the mathematical model. Descriptions for the ODEs and the modeling process are enclo...
Simulation results with additional regulation “Maff → Cdk2 (:Cyclin E)” with respect to Maff. Dynami...
Outcomes produced by other regulatory sturctures. Apparently false dynamics resulted by other hypoth...
Figure S1. Chemotherapy-induced niche contributes to the increase of ROS and apoptosis in HSCs. (a) ...
Supplemental data for illustrating the differentiation blockade in the hematopoietic cascade. (A). A...
List of model reactions and kinetic parameters. Table S2. Initial levels of the model species. (PDF ...
Figure S3. ChromHMM model of 15 chromtain states defined by all 8 histone modifications. (PDF 358Â k...
Supplemental data for illustrating the increased quiescence of HSCs. (A-B). Fitness of the models in...
The list of highly variable genes in the Bcl11a +/+ , sBcl11a +/+ and Bcl11a â/â HSC dataset and...
Cell cycle analysis of MDA-hyb1 and MDA-hyb2 cells. Cell cycle analysis was performed by DNA labelin...
Pathway analysis showing enrichment for genes involved in early B-cell function in our model. (PPT 1...
Figure S5. Spearman correlation of H3K36me3 occupancy and gene expression levels in all samples. (PD...
Reconstructed models in SBML format. The zipped file with 3 subfolders (cancer, monocyte and macroph...
Table S7. Human HCC tissue-derived metabolic genes (HMGs) mimicked by HLE or HUH7 cells upon compari...
Table S2. HCC-associated genes. Contains a set of genes often associated with HCC, including those r...
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