<p><i>KEGG pathway identifier (ID)</i> and <i>description</i> is enclosed in the table. Pathway’s <i>main category</i> and <i>subcategory</i> are shown. <i>Gene</i>:<i>Bg Ratio</i> indicates the number of genes annotated to a pathway (within the specific list of 1,905 out of 5,084 differential genes which appear in KEGG database) versus the number of genes annotated to that specific pathway within the background. Background considers all genes included in the database which corresponds to 6,997 elements. Pathways are sorted based on their <i>adj p-val</i> (FDR correction) coded as *** < 0.001, ** < 0.01 and * < 0.05. <i>Up-reg[%]</i> indicates the percentage of differential genes annotated to the specific pathway being up-regulated.</p
<p>*Pathways that include genes from the prognostic signature are shown.</p><p>FDR, False Discovery ...
<p>The number of pathways belong to each subclass is shown in parentheses. Pathways mentioned in sec...
<p>Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of <i>in planta</i> up-regulated ...
<p>Pathways are connected through their differential annotated genes for each Independent Component ...
*<p>KEGG, Kyoto Encyclopedia of Genes and Genomes. “total gene count” means the number of genes in e...
<p>The 19 significantly enriched pathways identified by Kyoto Encyclopedia of Genes and Genomes (KEG...
<p><b>Notes:</b> Count: the number of DEGs. Size: the total number of genes in the pathway</p><p><b>...
(A) The most 10 significant pathways and the DEGs count involved in these pathways of up-regulated D...
<p>The significant pathways: “p53” (A) and “cell cycle” (B) of regulated genes are demonstrated. Dif...
Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of variants of uncertain signific...
a<p>The number of genes mapped to each KEGG pathway in the whole transcriptome.</p>b<p>The number of...
(A) KEGG pathways enriched for the differentially expressed lncRNAs (DE-lncRNAs) correlated with dif...
<p>The top row gives the number of unique genes present in the top 100 miR-mRNA interactions accordi...
(A) The most 10 significant pathways and the DEGs count involved in these pathways of down-regulated...
<p>The ranks of KEGG pathways are plotted against the numbers of genes in the pathways. Pathways are...
<p>*Pathways that include genes from the prognostic signature are shown.</p><p>FDR, False Discovery ...
<p>The number of pathways belong to each subclass is shown in parentheses. Pathways mentioned in sec...
<p>Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of <i>in planta</i> up-regulated ...
<p>Pathways are connected through their differential annotated genes for each Independent Component ...
*<p>KEGG, Kyoto Encyclopedia of Genes and Genomes. “total gene count” means the number of genes in e...
<p>The 19 significantly enriched pathways identified by Kyoto Encyclopedia of Genes and Genomes (KEG...
<p><b>Notes:</b> Count: the number of DEGs. Size: the total number of genes in the pathway</p><p><b>...
(A) The most 10 significant pathways and the DEGs count involved in these pathways of up-regulated D...
<p>The significant pathways: “p53” (A) and “cell cycle” (B) of regulated genes are demonstrated. Dif...
Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of variants of uncertain signific...
a<p>The number of genes mapped to each KEGG pathway in the whole transcriptome.</p>b<p>The number of...
(A) KEGG pathways enriched for the differentially expressed lncRNAs (DE-lncRNAs) correlated with dif...
<p>The top row gives the number of unique genes present in the top 100 miR-mRNA interactions accordi...
(A) The most 10 significant pathways and the DEGs count involved in these pathways of down-regulated...
<p>The ranks of KEGG pathways are plotted against the numbers of genes in the pathways. Pathways are...
<p>*Pathways that include genes from the prognostic signature are shown.</p><p>FDR, False Discovery ...
<p>The number of pathways belong to each subclass is shown in parentheses. Pathways mentioned in sec...
<p>Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of <i>in planta</i> up-regulated ...