Table S1. Linkage map information. Table S2. Digenic interactions/epistatic QTLs (LOD >5.0) using ICIM-EPI method in single environments E1, E2, and E3. Table S3. Significant QTLs detected in two environments (E2 and E3) for traits related to salt tolerance in an IR29/Hasawi RIL population by inclusive composite interval mapping (ICIM) through combined analysis. Table S4. Responses of different salt-tolerant RIL genotypes of rice and their parents under salt stress at seedling stage in (a) the Philippines, (b) Senegal, and (c) Tanzania. (DOCX 47 kb
Filtered and effective numbers of SNPs across subpopulations and adjusted significant P value thresh...
 List of wild rice accessions, their place of collection and Standard Evaluation System (SES) score...
Figure S1. Heat map, relative abundance and total abundance of ribotypes (T-RFâs) present in the d...
Table S2. List of rice accessions and phenotypic data used for association mapping. The average valu...
Table S1. Summary of sequencing results. Table S2. A summary of the assembly statistics. Table S4. H...
Table S3. Pearson’s correlation coefficients of the phenotypic traits measured in 104 rice accession...
Table S1. List of all rice accessions used for SNP genotyping. Rice accessions are tabled with their...
Abstract Background Salinity is one of the most severe and widespread abiotic stresses that affect r...
Chromosomal locations and logarithm of odds (LOD) scores of the major QTL conditioning SPH and PHI o...
Figure S5. Heat map, relative abundance and total abundance of ribotypes (T-RF’s) after HhaI digesti...
Figure S4. Manhattan plots of different traits related to salinity tolerance at seedling stage. The ...
Figure S2. Population structure of 190 rice association panels, which consisted mostly of the indica...
Figure S1. Frequency distribution of PN: net photosynthetic rate; gs: stomatal conductance; E: trans...
Table S4. List of significant SNPs from GWA mapping for various traits under control and stress con...
Figure S3. The peak regions on rice chromosomes containing significant SNPs from GWAS of PAN (a and ...
Filtered and effective numbers of SNPs across subpopulations and adjusted significant P value thresh...
 List of wild rice accessions, their place of collection and Standard Evaluation System (SES) score...
Figure S1. Heat map, relative abundance and total abundance of ribotypes (T-RFâs) present in the d...
Table S2. List of rice accessions and phenotypic data used for association mapping. The average valu...
Table S1. Summary of sequencing results. Table S2. A summary of the assembly statistics. Table S4. H...
Table S3. Pearson’s correlation coefficients of the phenotypic traits measured in 104 rice accession...
Table S1. List of all rice accessions used for SNP genotyping. Rice accessions are tabled with their...
Abstract Background Salinity is one of the most severe and widespread abiotic stresses that affect r...
Chromosomal locations and logarithm of odds (LOD) scores of the major QTL conditioning SPH and PHI o...
Figure S5. Heat map, relative abundance and total abundance of ribotypes (T-RF’s) after HhaI digesti...
Figure S4. Manhattan plots of different traits related to salinity tolerance at seedling stage. The ...
Figure S2. Population structure of 190 rice association panels, which consisted mostly of the indica...
Figure S1. Frequency distribution of PN: net photosynthetic rate; gs: stomatal conductance; E: trans...
Table S4. List of significant SNPs from GWA mapping for various traits under control and stress con...
Figure S3. The peak regions on rice chromosomes containing significant SNPs from GWAS of PAN (a and ...
Filtered and effective numbers of SNPs across subpopulations and adjusted significant P value thresh...
 List of wild rice accessions, their place of collection and Standard Evaluation System (SES) score...
Figure S1. Heat map, relative abundance and total abundance of ribotypes (T-RFâs) present in the d...