Additional file 3 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Additional file 4: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

DEGs detected with absolute FC > 2 and adjusted p < 0.01 only in the response to the feeding of Lon...

Additional file 5: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

List of DEGs analyzed by qRT-PCR. A total of 34 genes involved in the flavonoid, theanine and caffei...

Additional file 5 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 5: Table S2: ESI-MS/MS parameters for determination of eight phytohormones

Additional file 9 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 9: Supplementary Table 6. The correlation analysis list of DEGs and DAMs

Additional file 10 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 10: Supplementary Table 7. The correlation matrix of 23 DAMs and 118 DEGs

Additional file 6 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 6: Supplementary Table 3. The statistical of mapping reference genome

Additional file 12 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 12: Supplementary Table 9. The gene expression patten in phenylpropanoid biosynthesi...

Additional file 11 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 11: Supplementary Table 8. The WRKY40 transcription factor targets predicted

Transcriptome and metabolome analysis reveal candidate genes and biochemicals involved in tea geometrid defense in Camellia sinensis

Wei-Wei Wang (1626301)
Chao Zheng (728465)
Wan-Jun Hao (408177)
Chun-Lei Ma (544233)
Jian-Qiang Ma (544231)
De-Jiang Ni (3439100)
Liang Chen (73736)

August 2018

<div>Tea plant (Camellia sinensis (L) O. Kuntze) respond to herbivore attack through large...

Additional file 7: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

List of DEGs and their FC values associated with the hormone and phenylpropanoid metabolism and defe...

Transcriptome and metabolome analysis reveal candidate genes and biochemicals involved in tea geometrid defense in Camellia sinensis.

Wei-Wei Wang
Chao Zheng
Wan-Jun Hao
Chun-Lei Ma
Jian-Qiang Ma
De-Jiang Ni
Liang Chen

January 2018

Tea plant (Camellia sinensis (L) O. Kuntze) respond to herbivore attack through large changes in def...

Additional file 6: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

GSA results for the DEGs detected with an adjusted p < 0.01 in response to the feeding of London mi...

Additional file 3: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

The rich factors and number of genes involved in each pathway derived from a comparison of gene expr...

Defensive Responses of Tea Plants (Camellia sinensis) Against Tea Green Leafhopper Attack: A Multi-Omics Study.

Zhao, Xiaoman
Chen, Si
Wang, Shanshan
Shan, Wenna
Wang, Xiaxia
Lin, Yuzhen
Su, Feng
Yang, Zhenbiao
Yu, Xiaomin

January 2019

Tea green leafhopper [Empoasca (Matsumurasca) onukii Matsuda] is one of the most devastating pests o...

Additional file 2: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

Statistical comparison of DEGs between any two tissues. The genes were classified into three classes...

Additional file 4: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

DEGs detected with absolute FC > 2 and adjusted p < 0.01 only in the response to the feeding of Lon...

Additional file 5: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

List of DEGs analyzed by qRT-PCR. A total of 34 genes involved in the flavonoid, theanine and caffei...

Additional file 5 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 5: Table S2: ESI-MS/MS parameters for determination of eight phytohormones

Additional file 9 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 9: Supplementary Table 6. The correlation analysis list of DEGs and DAMs

Additional file 10 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 10: Supplementary Table 7. The correlation matrix of 23 DAMs and 118 DEGs

Additional file 6 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 6: Supplementary Table 3. The statistical of mapping reference genome

Additional file 12 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 12: Supplementary Table 9. The gene expression patten in phenylpropanoid biosynthesi...

Additional file 11 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Xiaoping Wang (110673)
Yunjia Xiang (17612778)
Minshan Sun (6002147)
Yuanyuan Xiong (5505200)
Chunhua Li (18618)
Ting Zhang (102583)
Weiwei Ma (665256)
Yun Wang (32846)
Xiao Liu (65413)

December 2023

Additional file 11: Supplementary Table 8. The WRKY40 transcription factor targets predicted

Transcriptome and metabolome analysis reveal candidate genes and biochemicals involved in tea geometrid defense in Camellia sinensis

Wei-Wei Wang (1626301)
Chao Zheng (728465)
Wan-Jun Hao (408177)
Chun-Lei Ma (544233)
Jian-Qiang Ma (544231)
De-Jiang Ni (3439100)
Liang Chen (73736)

August 2018

<div>Tea plant (Camellia sinensis (L) O. Kuntze) respond to herbivore attack through large...

Additional file 7: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

List of DEGs and their FC values associated with the hormone and phenylpropanoid metabolism and defe...

Transcriptome and metabolome analysis reveal candidate genes and biochemicals involved in tea geometrid defense in Camellia sinensis.

Wei-Wei Wang
Chao Zheng
Wan-Jun Hao
Chun-Lei Ma
Jian-Qiang Ma
De-Jiang Ni
Liang Chen

January 2018

Tea plant (Camellia sinensis (L) O. Kuntze) respond to herbivore attack through large changes in def...

Additional file 6: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

GSA results for the DEGs detected with an adjusted p < 0.01 in response to the feeding of London mi...

Additional file 3: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

The rich factors and number of genes involved in each pathway derived from a comparison of gene expr...

Defensive Responses of Tea Plants (Camellia sinensis) Against Tea Green Leafhopper Attack: A Multi-Omics Study.

Zhao, Xiaoman
Chen, Si
Wang, Shanshan
Shan, Wenna
Wang, Xiaxia
Lin, Yuzhen
Su, Feng
Yang, Zhenbiao
Yu, Xiaomin

January 2019

Tea green leafhopper [Empoasca (Matsumurasca) onukii Matsuda] is one of the most devastating pests o...

Additional file 2: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

Statistical comparison of DEGs between any two tissues. The genes were classified into three classes...

Additional file 4: of Comparative genome-wide transcriptome analysis of Vitis vinifera responses to adapted and non-adapted strains of two-spotted spider mite, Tetranyhus urticae

Jose Díaz-Riquelme (3529493)
Vladimir Zhurov (126731)
Cristina Rioja (277145)
Ignacio Pérez-Moreno (3529490)
Rafael Torres-Pérez (3450596)
Jérôme Grimplet (3450590)
Pablo Carbonell-Bejerano (154337)
Sabina Bajda (3452678)
Thomas Van Leeuwen (364016)
José Martínez-Zapater (3450599)
Miodrag Grbic (3529496)
Vojislava Grbic (143333)

January 2016

DEGs detected with absolute FC > 2 and adjusted p < 0.01 only in the response to the feeding of Lon...

Additional file 5: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

List of DEGs analyzed by qRT-PCR. A total of 34 genes involved in the flavonoid, theanine and caffei...

Additional file 5 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 5: Table S2: ESI-MS/MS parameters for determination of eight phytohormones

Additional file 3 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Abstract

Extracted data

Additional file 3 of Transcriptomic and metabolomic analyses reveals keys genes and metabolic pathways in tea (Camellia sinensis) against six-spotted spider mite (Eotetranychus Sexmaculatus)

Abstract

Extracted data

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