The molecular dynamic results: A) the root mean square deviation (RMSD) for the free and the associated peptides, B) The root mean square deviation (RMSD) for the peptides vs time. (The root mean square deviation (RMSD) in Å for the five peptides YSM21, PSM22, PSW31, WQA34 and RNR1: the free peptides (in red color) and the associated peptides (in orange color); B) The root mean square deviation (RMSD) for these five peptides vs time in nano second).</p
<p>(A) A plot of RMSD for back bone vs. time (1.2 ns) for peptide <b>1 m</b> (black), peptide <b>3</...
<p>Root mean square deviation (RMSD) plot for the apo TPR receptor (black trace), the Hsp70 C-termin...
<p>The root-mean-square deviation (RMSD) of the backbone atoms relative to their crystal structure a...
<p>(a) Time course of root mean square deviations (RMSDs) of wild-type CycT1 (left) and CycT1 mutant...
<p>The results of the two molecular simulation runs are presented separately.</p
<p>A) The evolution of the RMSD (Root Mean Square Deviation) of WT-g14-3-3 (in red) and Pho-g14-3-3 ...
<p>RMSDs of transmembrane helix backbone beads determined from 100 coarse-grained (CG) homodimerizat...
(a) Root mean squared deviation (RMSD) of RNA aptamers, and (b) radius of gyration (Rg) for each RNA...
<p>Backbone root-mean-square deviation (RMSD) of the PSI dimer at pH 3.0 (<b>A</b>) and pH 7.4 (<b>B...
<p>(A) Control plots representing the stability of the models during the molecular dynamics run. The...
<p><b>(A)</b> The root mean square deviations (RMSDs) from the initial coordinates computed on the C...
<p>(A) The backbone atom root mean square deviation (RMSD) for apo, inhibitor bound, apo (truncated)...
In all three replicates the RMSD is still increasing at 500 ns, indicating that CmeC is not yet full...
<p>The values were calculated from frames of two independent MD simulations. <b>(A)</b> RMSD time co...
a) RMSD analysis was carried out for the molecular dynamics simulations of each system considering b...
<p>(A) A plot of RMSD for back bone vs. time (1.2 ns) for peptide <b>1 m</b> (black), peptide <b>3</...
<p>Root mean square deviation (RMSD) plot for the apo TPR receptor (black trace), the Hsp70 C-termin...
<p>The root-mean-square deviation (RMSD) of the backbone atoms relative to their crystal structure a...
<p>(a) Time course of root mean square deviations (RMSDs) of wild-type CycT1 (left) and CycT1 mutant...
<p>The results of the two molecular simulation runs are presented separately.</p
<p>A) The evolution of the RMSD (Root Mean Square Deviation) of WT-g14-3-3 (in red) and Pho-g14-3-3 ...
<p>RMSDs of transmembrane helix backbone beads determined from 100 coarse-grained (CG) homodimerizat...
(a) Root mean squared deviation (RMSD) of RNA aptamers, and (b) radius of gyration (Rg) for each RNA...
<p>Backbone root-mean-square deviation (RMSD) of the PSI dimer at pH 3.0 (<b>A</b>) and pH 7.4 (<b>B...
<p>(A) Control plots representing the stability of the models during the molecular dynamics run. The...
<p><b>(A)</b> The root mean square deviations (RMSDs) from the initial coordinates computed on the C...
<p>(A) The backbone atom root mean square deviation (RMSD) for apo, inhibitor bound, apo (truncated)...
In all three replicates the RMSD is still increasing at 500 ns, indicating that CmeC is not yet full...
<p>The values were calculated from frames of two independent MD simulations. <b>(A)</b> RMSD time co...
a) RMSD analysis was carried out for the molecular dynamics simulations of each system considering b...
<p>(A) A plot of RMSD for back bone vs. time (1.2 ns) for peptide <b>1 m</b> (black), peptide <b>3</...
<p>Root mean square deviation (RMSD) plot for the apo TPR receptor (black trace), the Hsp70 C-termin...
<p>The root-mean-square deviation (RMSD) of the backbone atoms relative to their crystal structure a...
DOI
Add to ORKG