<p>(A) Control plots representing the stability of the models during the molecular dynamics run. The root mean square deviation (RMSD) of the backbone atoms from the equilibrated conformation (0 ns) is presented as a function of time. The RMSD time profiles for WT-ANG, K17I, S28N, P112L, L35P, K60E and V113I are shown in black, red, dark green, blue, orange, pink, and light green, respectively. (B) Root mean square fluctuation (RMSF) values of atomic positions computed for the backbone atoms are shown as a function of residue number. The RMSF values for WT-ANG, K17I, S28N, P112L, L35P, K60E and V113I are shown in black, red, dark green, blue, orange, pink, and light green, respectively.</p
<p>RMSF was measured from a trajectory pooled from the final 400 ns of each replicate simulation, fo...
<p>(A) Root mean square deviation (RMSD) and (B) average root mean square fluctuation (RMSF) of resi...
<p>RMSD values of the backbone atoms relative to the initial minimized structures as functions of si...
<p>(A) RMSD profile of Nbp35-Cfd1 complex for all-atoms (red), backbone atoms (blue) and side chain ...
<p>The RMSD was calculated over the whole simulation process to check the stability of the unmodifie...
<p>A. Plot of root mean square deviation (RMSD) of model 1L P<sub>core</sub> Cα atoms versus simulat...
<p>(a–b). Root-mean-square deviations (RMSD) of the backbone atoms for two independent MD simulation...
<p>A) The evolution of the RMSD (Root Mean Square Deviation) of WT-g14-3-3 (in red) and Pho-g14-3-3 ...
<p>RMSD for the studied systems are represented in colors indicated at the right.</p
MD Simulation RMSD Plot of C-alpha atoms in proteins and ligands (A) Hesperetin (B) Curcumin (C) Iso...
<p>(a) Time course of root mean square deviations (RMSDs) of wild-type CycT1 (left) and CycT1 mutant...
<p>(A) The backbone atom root mean square deviation (RMSD) for apo, inhibitor bound, apo (truncated)...
<p>(A) Plot of the Backbone RMSD of TAZ2 along the simulation. The MD was fitted against the average...
<p>The root-mean-square deviations (RMSDs) of MTHase backbone atoms (blue curve) and all the G<sub>3...
<p><b>(A)</b> The root mean square deviations (RMSDs) from the initial coordinates computed on the C...
<p>RMSF was measured from a trajectory pooled from the final 400 ns of each replicate simulation, fo...
<p>(A) Root mean square deviation (RMSD) and (B) average root mean square fluctuation (RMSF) of resi...
<p>RMSD values of the backbone atoms relative to the initial minimized structures as functions of si...
<p>(A) RMSD profile of Nbp35-Cfd1 complex for all-atoms (red), backbone atoms (blue) and side chain ...
<p>The RMSD was calculated over the whole simulation process to check the stability of the unmodifie...
<p>A. Plot of root mean square deviation (RMSD) of model 1L P<sub>core</sub> Cα atoms versus simulat...
<p>(a–b). Root-mean-square deviations (RMSD) of the backbone atoms for two independent MD simulation...
<p>A) The evolution of the RMSD (Root Mean Square Deviation) of WT-g14-3-3 (in red) and Pho-g14-3-3 ...
<p>RMSD for the studied systems are represented in colors indicated at the right.</p
MD Simulation RMSD Plot of C-alpha atoms in proteins and ligands (A) Hesperetin (B) Curcumin (C) Iso...
<p>(a) Time course of root mean square deviations (RMSDs) of wild-type CycT1 (left) and CycT1 mutant...
<p>(A) The backbone atom root mean square deviation (RMSD) for apo, inhibitor bound, apo (truncated)...
<p>(A) Plot of the Backbone RMSD of TAZ2 along the simulation. The MD was fitted against the average...
<p>The root-mean-square deviations (RMSDs) of MTHase backbone atoms (blue curve) and all the G<sub>3...
<p><b>(A)</b> The root mean square deviations (RMSDs) from the initial coordinates computed on the C...
<p>RMSF was measured from a trajectory pooled from the final 400 ns of each replicate simulation, fo...
<p>(A) Root mean square deviation (RMSD) and (B) average root mean square fluctuation (RMSF) of resi...
<p>RMSD values of the backbone atoms relative to the initial minimized structures as functions of si...