Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 Mtb samples.

Comparison of drug resistance mutations identified by ViroSeq gentyping system and the in-house assay.

Arpan Acharya (621670)
Salil Vaniawala (621671)
Parth Shah (621672)
Rabindra Nath Misra (621673)
Minal Wani (621674)
Pratap N. Mukhopadhyaya (621675)

August 2014

The discordant mutations are shown in bold and underlined letters.Comparison of drug resis...

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 patients.

Yih-Yuan Chen (139708)
Jia-Ru Chang (139707)
Shu-Chen Kuo (139712)
Fan-Chen Tseng (139713)
Wei-Chen Huang (686968)
Tsi-Shu Huang (139709)
Yao-Shen Chen (139714)
Tzong-Shi Chiueh (139717)
Jun-Ren Sun (139715)
Ih-Jen Su (87501)
Horng-Yunn Dou (139720)

January 2015

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 ...

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequencing, including the misclassification of subtypes 1a and 1b) from the three assayed commercial tests compared to NS5B DNA sequencing.

Natalia Chueca (538023)
Isidro Rivadulla (2620735)
Rubén Lovatti (2620738)
Gabriel Reina (2620744)
Ana Blanco (436088)
Jose Angel Fernandez-Caballero (2620741)
Laura Cardeñoso (2620729)
Javier Rodriguez-Granjer (2620726)
Miriam Fernandez-Alonso (2620732)
Antonio Aguilera (239870)
Marta Alvarez (538022)
Juan Carlos Galán (178955)
Federico García (221130)

April 2016

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequenci...

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 Mtb samples.

Paulina M. Mejía-Ponce (17144913)
Elsy J. Ramos-González (17144916)
Axel A. Ramos-García (17144919)
Edgar E. Lara-Ramírez (10156604)
Alma R. Soriano-Herrera (17144922)
Mitzy F. Medellín-Luna (17144925)
Fernando Valdez-Salazar (17144928)
Claudia Y. Castro-Garay (17144931)
José J. Núñez-Contreras (17144934)
Marcos De Donato-Capote (17144937)
Ashutosh Sharma (1404922)
Julio E. Castañeda-Delgado (10156595)
Roberto Zenteno-Cuevas (4966426)
Jose Antonio Enciso-Moreno (7233695)
Cuauhtémoc Licona-Cassani (14038138)

October 2023

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 Mtb sampl...

Distribution of MTBDRplus assay results according to phenotypic drug resistance patterns using conventional drug susceptibility testing for specimens with both valid culture and MTBDRplus assay results.

Nestani Tukvadze (333421)
Russell R. Kempker (333422)
Iagor Kalandadze (333423)
Ekaterina Kurbatova (333424)
Michael K. Leonard (333425)
Rusudan Apsindzelashvili (333426)
Nino Bablishvili (141396)
Maia Kipiani (333427)
Henry M. Blumberg (333428)

February 2013

Distribution of MTBDRplus assay results according to phenotypic drug resistance patterns u...

Phenotypic drug resistance profiles and lineages of the M.tb isolates in the study.

Tuelo Mogashoa (4811610)
Pinkie Melamu (6672644)
Serej D. Ley (6592595)
Elizabeth M. Streicher (439727)
Thato Iketleng (4811595)
Nametso Kelentse (6672647)
Lucy Mupfumi (284290)
Margaret Mokomane (385199)
Botshelo Kgwaadira (6672650)
Vladimir Novitsky (124352)
Ishmael Kasvosve (2270098)
Sikhulile Moyo (250724)
Robin M. Warren (33593)
Simani Gaseitsiwe (268760)

May 2019

Phenotypic drug resistance profiles and lineages of the M.tb isolates in the study.</p

Comparison of the number of cases of resistance detection by phenotypic (DST) and genotypic web-based tools for ten TB anti-drugs.

Gabriel Morey-León (15229249)
Paulina M. Mejía-Ponce (17144913)
Juan Carlos Granda Pardo (17583187)
Karen Muñoz-Mawyin (17583190)
Juan Carlos Fernández-Cadena (10721949)
Evelyn García-Moreira (17583193)
Derly Andrade-Molina (10721952)
Cuauhtémoc Licona-Cassani (14038138)
Luisa Berná (4288387)

December 2023

Comparison of the number of cases of resistance detection by phenotypic (DST) and genotypic web-base...

Summary of drug resistance results for probe sets targeting differences between the WT and MT strain (08–1074).

Hillary N. Wood (6312683)
Tom Venken (161801)
Hanny Willems (702593)
An Jacobs (3926483)
Ana Júlia Reis (6312686)
Pedro Eduardo Almeida da Silva (365400)
Susanne Homolka (154791)
Stefan Niemann (62805)
Kyle H. Rohde (156939)
Jef Hooyberghs (3191223)

February 2019

Summary of drug resistance results for probe sets targeting differences between the WT and MT strain...

Detected genes associated with resistance to different classes of antibiotics and phenotypic susceptibility profiles to most of these classes of antibiotics.

Pepijn Huizinga (5703683)
Eefje Schrauwen (5703686)
Silvia García-Cobos (777258)
Ina Willemsen (538600)
Carlo Verhulst (821102)
Alexander W. Friedrich (79972)
Paul H. M. Savelkoul (317249)
John W. Rossen (519315)
Jan Kluytmans (309073)

August 2018

Detected genes associated with resistance to different classes of antibiotics and phenotypic suscept...

Drug resistance mutations identified in the patient samples sequenced using the Roche/454 GS Junior HIV drug resistance genotyping method.

Dawn M. Dudley (166399)
Emily N. Chin (141085)
Benjamin N. Bimber (166409)
Sabri S. Sanabani (166413)
Leandro F. Tarosso (166417)
Priscilla R. Costa (166420)
Mariana M. Sauer (80583)
Esper G. Kallas (36139)
David H. O.’Connor (166425)

May 2012

Drug resistance mutations identified in the patient samples sequenced using the Roche/454 GS Juni...

Tuberculosis ethambutol resistance: concordance between phenotypic and genotypic test results

Plinke, C
Cox, H S
Kalon, S
Doshetov, D
Rüsch-Gerdes, S
Niemann, S

October 2009

embB306 mutations are potential markers for detecting ethambutol resistance in clinical Mycobacteriu...

Overview of the dynamic changes in genotype frequencies in all MTB strains isolated from 421 patients.

Yih-Yuan Chen (139708)
Jia-Ru Chang (139707)
Shu-Chen Kuo (139712)
Fan-Chen Tseng (139713)
Wei-Chen Huang (686968)
Tsi-Shu Huang (139709)
Yao-Shen Chen (139714)
Tzong-Shi Chiueh (139717)
Jun-Ren Sun (139715)
Ih-Jen Su (87501)
Horng-Yunn Dou (139720)

January 2015

Overview of the dynamic changes in genotype frequencies in all MTB strains isolated from 421 pati...

Genomic resistance traits detected in the four-drug-resistant USA300 isolates (n = 6) by the online platform 1928 Diagnostics.

Josefine Enström (5942303)
Inga Fröding (5942306)
Christian G. Giske (202717)
Karolina Ininbergs (246047)
Xiangning Bai (416763)
Gustaf Sandh (5942309)
Ulla-Britt Tollström (5942312)
Måns Ullberg (621465)
Hong Fang (43040)

November 2018

Genomic resistance traits detected in the four-drug-resistant USA300 isolates (n = 6) by the online ...

Transmission dynamics of genotypes in isolates resistant (A) and sensitive (B) to first-line drugs.

Gloria Puerto (585494)
Lina Erazo (753411)
Maira Wintaco (753412)
Claudia Castro (585495)
Wellman Ribón (5664007)
Martha Inírida Guerrero (753413)

June 2015

Transmission dynamics of genotypes in isolates resistant (A) and sensitive (B) to first-line drug...

Subtype-specific drug resistance mutation sites analysis.

Hongshuai Sui (541677)
Tao Gui (541678)
Lei Jia (303610)
Wei Guo (86150)
Jingwan Han (541679)
Yongjian Liu (114678)
Zuoyi Bao (299683)
Hanping Li (114683)
Jingyun Li (114692)
Lin Li (28817)

March 2014

Note: horizontal numbers indicate drug resistance mutation sites in RT region with significant di...

Comparison of drug resistance mutations identified by ViroSeq gentyping system and the in-house assay.

Arpan Acharya (621670)
Salil Vaniawala (621671)
Parth Shah (621672)
Rabindra Nath Misra (621673)
Minal Wani (621674)
Pratap N. Mukhopadhyaya (621675)

August 2014

The discordant mutations are shown in bold and underlined letters.Comparison of drug resis...

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 patients.

Yih-Yuan Chen (139708)
Jia-Ru Chang (139707)
Shu-Chen Kuo (139712)
Fan-Chen Tseng (139713)
Wei-Chen Huang (686968)
Tsi-Shu Huang (139709)
Yao-Shen Chen (139714)
Tzong-Shi Chiueh (139717)
Jun-Ren Sun (139715)
Ih-Jen Su (87501)
Horng-Yunn Dou (139720)

January 2015

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 ...

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequencing, including the misclassification of subtypes 1a and 1b) from the three assayed commercial tests compared to NS5B DNA sequencing.

Natalia Chueca (538023)
Isidro Rivadulla (2620735)
Rubén Lovatti (2620738)
Gabriel Reina (2620744)
Ana Blanco (436088)
Jose Angel Fernandez-Caballero (2620741)
Laura Cardeñoso (2620729)
Javier Rodriguez-Granjer (2620726)
Miriam Fernandez-Alonso (2620732)
Antonio Aguilera (239870)
Marta Alvarez (538022)
Juan Carlos Galán (178955)
Federico García (221130)

April 2016

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequenci...

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 Mtb samples.

Paulina M. Mejía-Ponce (17144913)
Elsy J. Ramos-González (17144916)
Axel A. Ramos-García (17144919)
Edgar E. Lara-Ramírez (10156604)
Alma R. Soriano-Herrera (17144922)
Mitzy F. Medellín-Luna (17144925)
Fernando Valdez-Salazar (17144928)
Claudia Y. Castro-Garay (17144931)
José J. Núñez-Contreras (17144934)
Marcos De Donato-Capote (17144937)
Ashutosh Sharma (1404922)
Julio E. Castañeda-Delgado (10156595)
Roberto Zenteno-Cuevas (4966426)
Jose Antonio Enciso-Moreno (7233695)
Cuauhtémoc Licona-Cassani (14038138)

October 2023

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 Mtb sampl...

Distribution of MTBDRplus assay results according to phenotypic drug resistance patterns using conventional drug susceptibility testing for specimens with both valid culture and MTBDRplus assay results.

Nestani Tukvadze (333421)
Russell R. Kempker (333422)
Iagor Kalandadze (333423)
Ekaterina Kurbatova (333424)
Michael K. Leonard (333425)
Rusudan Apsindzelashvili (333426)
Nino Bablishvili (141396)
Maia Kipiani (333427)
Henry M. Blumberg (333428)

February 2013

Distribution of MTBDRplus assay results according to phenotypic drug resistance patterns u...

Phenotypic drug resistance profiles and lineages of the M.tb isolates in the study.

Tuelo Mogashoa (4811610)
Pinkie Melamu (6672644)
Serej D. Ley (6592595)
Elizabeth M. Streicher (439727)
Thato Iketleng (4811595)
Nametso Kelentse (6672647)
Lucy Mupfumi (284290)
Margaret Mokomane (385199)
Botshelo Kgwaadira (6672650)
Vladimir Novitsky (124352)
Ishmael Kasvosve (2270098)
Sikhulile Moyo (250724)
Robin M. Warren (33593)
Simani Gaseitsiwe (268760)

May 2019

Phenotypic drug resistance profiles and lineages of the M.tb isolates in the study.</p

Comparison of the number of cases of resistance detection by phenotypic (DST) and genotypic web-based tools for ten TB anti-drugs.

Gabriel Morey-León (15229249)
Paulina M. Mejía-Ponce (17144913)
Juan Carlos Granda Pardo (17583187)
Karen Muñoz-Mawyin (17583190)
Juan Carlos Fernández-Cadena (10721949)
Evelyn García-Moreira (17583193)
Derly Andrade-Molina (10721952)
Cuauhtémoc Licona-Cassani (14038138)
Luisa Berná (4288387)

December 2023

Comparison of the number of cases of resistance detection by phenotypic (DST) and genotypic web-base...

Summary of drug resistance results for probe sets targeting differences between the WT and MT strain (08–1074).

Hillary N. Wood (6312683)
Tom Venken (161801)
Hanny Willems (702593)
An Jacobs (3926483)
Ana Júlia Reis (6312686)
Pedro Eduardo Almeida da Silva (365400)
Susanne Homolka (154791)
Stefan Niemann (62805)
Kyle H. Rohde (156939)
Jef Hooyberghs (3191223)

February 2019

Summary of drug resistance results for probe sets targeting differences between the WT and MT strain...

Detected genes associated with resistance to different classes of antibiotics and phenotypic susceptibility profiles to most of these classes of antibiotics.

Pepijn Huizinga (5703683)
Eefje Schrauwen (5703686)
Silvia García-Cobos (777258)
Ina Willemsen (538600)
Carlo Verhulst (821102)
Alexander W. Friedrich (79972)
Paul H. M. Savelkoul (317249)
John W. Rossen (519315)
Jan Kluytmans (309073)

August 2018

Detected genes associated with resistance to different classes of antibiotics and phenotypic suscept...

Drug resistance mutations identified in the patient samples sequenced using the Roche/454 GS Junior HIV drug resistance genotyping method.

Dawn M. Dudley (166399)
Emily N. Chin (141085)
Benjamin N. Bimber (166409)
Sabri S. Sanabani (166413)
Leandro F. Tarosso (166417)
Priscilla R. Costa (166420)
Mariana M. Sauer (80583)
Esper G. Kallas (36139)
David H. O.’Connor (166425)

May 2012

Drug resistance mutations identified in the patient samples sequenced using the Roche/454 GS Juni...

Tuberculosis ethambutol resistance: concordance between phenotypic and genotypic test results

Plinke, C
Cox, H S
Kalon, S
Doshetov, D
Rüsch-Gerdes, S
Niemann, S

October 2009

embB306 mutations are potential markers for detecting ethambutol resistance in clinical Mycobacteriu...

Overview of the dynamic changes in genotype frequencies in all MTB strains isolated from 421 patients.

Yih-Yuan Chen (139708)
Jia-Ru Chang (139707)
Shu-Chen Kuo (139712)
Fan-Chen Tseng (139713)
Wei-Chen Huang (686968)
Tsi-Shu Huang (139709)
Yao-Shen Chen (139714)
Tzong-Shi Chiueh (139717)
Jun-Ren Sun (139715)
Ih-Jen Su (87501)
Horng-Yunn Dou (139720)

January 2015

Overview of the dynamic changes in genotype frequencies in all MTB strains isolated from 421 pati...

Genomic resistance traits detected in the four-drug-resistant USA300 isolates (n = 6) by the online platform 1928 Diagnostics.

Josefine Enström (5942303)
Inga Fröding (5942306)
Christian G. Giske (202717)
Karolina Ininbergs (246047)
Xiangning Bai (416763)
Gustaf Sandh (5942309)
Ulla-Britt Tollström (5942312)
Måns Ullberg (621465)
Hong Fang (43040)

November 2018

Genomic resistance traits detected in the four-drug-resistant USA300 isolates (n = 6) by the online ...

Transmission dynamics of genotypes in isolates resistant (A) and sensitive (B) to first-line drugs.

Gloria Puerto (585494)
Lina Erazo (753411)
Maira Wintaco (753412)
Claudia Castro (585495)
Wellman Ribón (5664007)
Martha Inírida Guerrero (753413)

June 2015

Transmission dynamics of genotypes in isolates resistant (A) and sensitive (B) to first-line drug...

Subtype-specific drug resistance mutation sites analysis.

Hongshuai Sui (541677)
Tao Gui (541678)
Lei Jia (303610)
Wei Guo (86150)
Jingwan Han (541679)
Yongjian Liu (114678)
Zuoyi Bao (299683)
Hanping Li (114683)
Jingyun Li (114692)
Lin Li (28817)

March 2014

Note: horizontal numbers indicate drug resistance mutation sites in RT region with significant di...

Comparison of drug resistance mutations identified by ViroSeq gentyping system and the in-house assay.

Arpan Acharya (621670)
Salil Vaniawala (621671)
Parth Shah (621672)
Rabindra Nath Misra (621673)
Minal Wani (621674)
Pratap N. Mukhopadhyaya (621675)

August 2014

The discordant mutations are shown in bold and underlined letters.Comparison of drug resis...

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 patients.

Yih-Yuan Chen (139708)
Jia-Ru Chang (139707)
Shu-Chen Kuo (139712)
Fan-Chen Tseng (139713)
Wei-Chen Huang (686968)
Tsi-Shu Huang (139709)
Yao-Shen Chen (139714)
Tzong-Shi Chiueh (139717)
Jun-Ren Sun (139715)
Ih-Jen Su (87501)
Horng-Yunn Dou (139720)

January 2015

Overview of the dynamic changes in drug-resistance patterns in all MTB strains isolated from 421 ...

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequencing, including the misclassification of subtypes 1a and 1b) from the three assayed commercial tests compared to NS5B DNA sequencing.

Natalia Chueca (538023)
Isidro Rivadulla (2620735)
Rubén Lovatti (2620738)
Gabriel Reina (2620744)
Ana Blanco (436088)
Jose Angel Fernandez-Caballero (2620741)
Laura Cardeñoso (2620729)
Javier Rodriguez-Granjer (2620726)
Miriam Fernandez-Alonso (2620732)
Antonio Aguilera (239870)
Marta Alvarez (538022)
Juan Carlos Galán (178955)
Federico García (221130)

April 2016

Major discordances (differences in the assigned genotype by a commercial method and NS5B sequenci...

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 <i>Mtb</i> samples.

Abstract

Extracted data

Discrepancies between the phenotype and genotype prediction of drug resistance from the 85 <i>Mtb</i> samples.

Abstract

Extracted data

Related items

Related items