Data from: Structure and functioning of intertidal food webs along an avian flyway: A comparative approach using stable isotopes

Food webs and trophic dynamics of coastal systems have been the focus of intense research throughout the world, as they prove to be critical in understanding ecosystem processes and functions. However, very few studies have undertaken a quantitative comparison of entire food webs from a key consumer perspective across a broad geographical area, limiting relevant comparisons among systems with distinct biotic and abiotic components. We investigate the structure and functioning of food webs in four tidal ecosystems of international importance for migratory shorebirds along the East Atlantic Flyway: Tejo estuary in Portugal, Sidi Moussa in Morocco, Banc d'Arguin in Mauritania and Bijagós archipelago in Guinea-Bissau. Basal food sources, shorebirds and their prey (benthic invertebrates) were sampled in all areas, and Bayesian stable isotope mixing models and community-wide metrics were used in a comparative analysis among areas. Significant differences among study areas were found in the structure of food webs, as well as in the relative importance of basal resource pools supporting each food web. Overall, the food web of Banc d'Arguin was characterized by lower trophic diversity and higher functional redundancy than the other sites. This result might be explained by the low number of trophic pathways of organic matter transfer in this seagrass-dominated system which, as a fossil estuary, lacks inputs from both freshwater and nutrient-rich offshore oceanic waters. Structure of shorebird communities was consistent with the main organizational patterns found for each food web, highlighting the less diverse character of the community of Banc d'Arguin. At Banc d'Arguin and Bijagós archipelago, which displayed the smallest and largest isotopic niche widths in bird assemblage, respectively, mean niche overlap among species was low, suggesting high interspecific partitioning in resource use. Tropical systems typically offer comparatively lower harvestable prey biomass for shorebirds and might thus strengthen interspecific competition, leading to low niche overlap among species. Our study reveals relevant differences in the structure of food webs and shorebird communities in coastal areas along an avian flyway. While differences in trophic redundancy of food webs point to distinct levels of ecosystem resilience, contrasts in the organization of shorebird communities highlight the plasticity in the foraging behaviour of species inhabiting areas with distinct environmental conditions. The data package contains two sets: - Carbon and Nitrogen Stable Isotopes of Shorebirds Carbon and nitrogen stable isotopic signatures of shorebird toenails collected at four wintering areas: Tejo estuary (Portugal), Sidi Moussa (Morocco), Banc d'Arguin (Mauritania) and Bijagós archipelago (Guinea-Bissau) - Carbon and Nitrogen Stable Isotopes of Trophic Web Components Carbon and nitrogen stable isotopic signatures of components of trophic webs (bassal sources of organic matter, algae, vegetation, zooplankton and benthic macroinvertebrates) collected at four wintering areas: Tejo estuary (Portugal), Sidi Moussa (Morocco), Banc d'Arguin (Mauritania) and Bijagós archipelago (Guinea-Bissau